diff options
Diffstat (limited to 'sci-libs')
| -rw-r--r-- | sci-libs/gsl/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-libs/gsl/Manifest | 27 | ||||
| -rw-r--r-- | sci-libs/gsl/files/gsl-1.16-cblas.patch | 294 | ||||
| -rw-r--r-- | sci-libs/gsl/gsl-1.16.ebuild | 103 |
4 files changed, 426 insertions, 8 deletions
diff --git a/sci-libs/gsl/ChangeLog b/sci-libs/gsl/ChangeLog index ec1cec542e00..d4e6ae09e6e2 100644 --- a/sci-libs/gsl/ChangeLog +++ b/sci-libs/gsl/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-libs/gsl -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/gsl/ChangeLog,v 1.85 2013/03/29 12:17:43 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-libs/gsl/ChangeLog,v 1.86 2014/04/16 13:34:45 hasufell Exp $ + +*gsl-1.16 (16 Apr 2014) + + 16 Apr 2014; Julian Ospald <hasufell@gentoo.org> +files/gsl-1.16-cblas.patch, + +gsl-1.16.ebuild: + version bump wrt #507158 29 Mar 2013; Justin Lecher <jlec@gentoo.org> gsl-1.14-r1.ebuild, gsl-1.15.ebuild: diff --git a/sci-libs/gsl/Manifest b/sci-libs/gsl/Manifest index 2fe097b7bb51..91a017a3bf33 100644 --- a/sci-libs/gsl/Manifest +++ b/sci-libs/gsl/Manifest @@ -1,5 +1,5 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA512 +Hash: SHA256 AUX cblas.pc.in 290 SHA256 f47133de2f49a5ff53c8e295d03fbe8923c79cd0978cedb903cfdf7e57a873a1 SHA512 2a1dc22097e2a50fd4a797c446b32202b74e9d754c8b61c51a3789c3eb42372adcc7fb25901c468d604cc4e7961d7f11e0e5883179894047948e46879fc04719 WHIRLPOOL f8e93aa2c61d3ac08664c3162f0e754c1d6cefca0a4d4ab8ee8f763e6ec46049ff5537c7f9266200856b58ffab88fb9af115eb4be32deb99ed6d2005abcb13ec AUX eselect.cblas.gsl 216 SHA256 2be1ba93a0bafa73df52913f54d1c7fd299aa1cd0a98c5fbe4eac894073ebac7 SHA512 e5cd92f4e9829538642a0fed54fdf75bc579c8c20769997ec5a3ce0287993476e68fbeefec8e46162d05ea908d2e79187c15ebdd00f6558ecbd25de21ece64dc WHIRLPOOL 1a0591e670a1ca51fa6cc4b2883931a49f3da59c2c673d786f6acdb72b50b7fee22ee30f2d3c6ac864c149381c23ca5c41ba586f159830cdeff97b86cf6a03f3 @@ -7,17 +7,32 @@ AUX gsl-1.13-cblas-vars.patch 403 SHA256 207b8fe48affca2564fcfffb9a01cca257f6bd1 AUX gsl-1.13-cblas.patch 15524 SHA256 77e8a1df3d27723621efd41dc817699eef21f6b77717ad96f4d929f871524890 SHA512 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ext_cblas=no ;; ++ yes) ext_cblas=yes ;; ++ -* | */* | *.a | *.so | *.so.* | *.o) ++ ext_cblas=yes ++ ext_cblas_libs="$with_cblas" ;; ++ *) ext_cblas=yes ++ ext_cblas_libs="-l$with_cblas" ;; ++ esac ++ ++ AC_ARG_WITH(cblas-external-libs, ++ [AS_HELP_STRING([--with-cblas-external-libs=<libs>], ++ [External cblas libraries to link with (default is "$ext_cblas_libs")])], ++ [ext_cblas_libs=$withval], ++ []) ++ ++ AC_ARG_WITH(cblas-external-cflags, ++ [AS_HELP_STRING([--with-cblas-external-cflags=<flags>], ++ [Pre-processing flags to compile with external cblas ("-I<dir>")])], ++ [ext_cblas_cflags=$withval], ++ []) ++ ++ if test x$ext_cblas != xno; then ++ if test "x$CBLAS_LIBS" = x; then ++ CBLAS_LIBS="$ext_cblas_libs" ++ fi ++ if test "x$CBLAS_CFLAGS" = x; then ++ CBLAS_CFLAGS="$ext_cblas_cflags" ++ fi ++ ++ CFLAGS_sav="$CFLAGS" ++ CFLAGS="$CFLAGS $CBLAS_CFLAGS" ++ AC_CHECK_HEADER(cblas.h, , ++ [AC_MSG_ERROR([ ++ *** Header file cblas.h not found. ++ *** If you installed cblas header in a non standard place, ++ *** specify its install prefix using the following option ++ *** --with-cblas-external-cflags="-I<include_dir>"]) ++ ]) ++ CFLAGS="$CFLAGS_sav" ++ ++ LIBS_sav="$LIBS" ++ LIBS="$LIBS $CBLAS_LIBS -lm" ++ AC_MSG_CHECKING([for cblas_sgemm in $CBLAS_LIBS]) ++ AC_TRY_LINK_FUNC(cblas_sgemm, [ext_cblas=yes], ++ [AC_MSG_ERROR([ ++ *** Linking with cblas with $LIBS failed. ++ *** If you installed cblas library in a non standard place, ++ *** specify its install prefix using the following option ++ *** --with-cblas-external-libs="-L<lib_dir> -l<lib>"]) ++ ]) ++ AC_MSG_RESULT($ext_cblas) ++ LIBS="$LIBS_sav" ++ AC_SUBST([CBLAS_CFLAGS]) ++ AC_SUBST([CBLAS_LIBS]) ++ fi ++]) +diff -Nur gsl-1.16.orig/bspline/Makefile.am gsl-1.16/bspline/Makefile.am +--- gsl-1.16.orig/bspline/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/bspline/Makefile.am 2013-08-19 15:25:27.728497742 -0700 +@@ -12,6 +12,6 @@ + + TESTS = $(check_PROGRAMS) + +-test_LDADD = libgslbspline.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../cblas/libgslcblas.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ../statistics/libgslstatistics.la ++test_LDADD = libgslbspline.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la @CBLAS_LINK_LIBS@ ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ../statistics/libgslstatistics.la + + test_SOURCES = test.c +diff -Nur gsl-1.16.orig/configure.ac gsl-1.16/configure.ac +--- gsl-1.16.orig/configure.ac 2013-07-19 08:14:45.000000000 -0700 ++++ gsl-1.16/configure.ac 2013-08-19 15:28:24.172640793 -0700 +@@ -191,6 +191,16 @@ + AC_CHECK_LIB(m, cos) + fi + ++sinclude(ax_cblas.m4) ++AX_CBLAS ++if test "x$CBLAS_LIBS" != "x"; then ++ CBLAS_LINK_LIBS="$CBLAS_LIBS" ++else ++ CBLAS_LINK_LIBS="\$(top_builddir)/cblas/libgslcblas.la" ++ CBLAS_LIBS="-lgslcblas" ++fi ++AC_SUBST(CBLAS_LINK_LIBS) ++ + dnl Remember to put a definition in acconfig.h for each of these + AC_CHECK_DECLS(feenableexcept,,,[#define _GNU_SOURCE 1 + #include <fenv.h>]) +diff -Nur gsl-1.16.orig/eigen/Makefile.am gsl-1.16/eigen/Makefile.am +--- gsl-1.16.orig/eigen/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/eigen/Makefile.am 2013-08-19 15:25:27.728497742 -0700 +@@ -11,7 +11,7 @@ + + TESTS = $(check_PROGRAMS) + +-test_LDADD = libgsleigen.la ../test/libgsltest.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../sys/libgslsys.la ../err/libgslerr.la ../utils/libutils.la ../rng/libgslrng.la ../sort/libgslsort.la ++test_LDADD = libgsleigen.la ../test/libgsltest.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../sys/libgslsys.la ../err/libgslerr.la ../utils/libutils.la ../rng/libgslrng.la ../sort/libgslsort.la + + test_SOURCES = test.c + +diff -Nur gsl-1.16.orig/gsl-config.in gsl-1.16/gsl-config.in +--- gsl-1.16.orig/gsl-config.in 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/gsl-config.in 2013-08-19 15:25:27.728497742 -0700 +@@ -58,11 +58,11 @@ + ;; + + --cflags) +- echo @GSL_CFLAGS@ ++ echo @GSL_CFLAGS@ @CBLAS_CFLAGS@ + ;; + + --libs) +- : ${GSL_CBLAS_LIB=-lgslcblas} ++ : ${GSL_CBLAS_LIB=@CBLAS_LIBS@} + echo @GSL_LIBS@ $GSL_CBLAS_LIB @GSL_LIBM@ + ;; + +diff -Nur gsl-1.16.orig/gsl.pc.in gsl-1.16/gsl.pc.in +--- gsl-1.16.orig/gsl.pc.in 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/gsl.pc.in 2013-08-19 15:25:27.728497742 -0700 +@@ -2,7 +2,7 @@ + exec_prefix=@exec_prefix@ + libdir=@libdir@ + includedir=@includedir@ +-GSL_CBLAS_LIB=-lgslcblas ++GSL_CBLAS_LIB=@CBLAS_LIBS@ + + Name: GSL + Description: GNU Scientific Library +diff -Nur gsl-1.16.orig/interpolation/Makefile.am gsl-1.16/interpolation/Makefile.am +--- gsl-1.16.orig/interpolation/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/interpolation/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -10,7 +10,7 @@ + + TESTS = $(check_PROGRAMS) + +-test_LDADD = libgslinterpolation.la ../poly/libgslpoly.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../cblas/libgslcblas.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++test_LDADD = libgslinterpolation.la ../poly/libgslpoly.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la @CBLAS_LINK_LIBS@ ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + + test_SOURCES = test.c + +diff -Nur gsl-1.16.orig/linalg/Makefile.am gsl-1.16/linalg/Makefile.am +--- gsl-1.16.orig/linalg/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/linalg/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -12,7 +12,7 @@ + + check_PROGRAMS = test + +-test_LDADD = libgsllinalg.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../permutation/libgslpermutation.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++test_LDADD = libgsllinalg.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../permutation/libgslpermutation.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + + test_SOURCES = test.c + +diff -Nur gsl-1.16.orig/Makefile.am gsl-1.16/Makefile.am +--- gsl-1.16.orig/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -19,13 +19,12 @@ + + lib_LTLIBRARIES = libgsl.la + libgsl_la_SOURCES = version.c +-libgsl_la_LIBADD = $(SUBLIBS) ++libgsl_la_LIBADD = $(SUBLIBS) @CBLAS_LINK_LIBS@ + libgsl_la_LDFLAGS = -version-info $(GSL_LT_VERSION) + noinst_HEADERS = templates_on.h templates_off.h build.h + + MINGW32_HOST = @MINGW32_HOST@ + if MINGW32_HOST +-libgsl_la_LIBADD += cblas/libgslcblas.la + libgsl_la_LDFLAGS += -no-undefined + endif + +@@ -35,10 +34,10 @@ + bin_PROGRAMS = gsl-randist gsl-histogram + + gsl_randist_SOURCES = gsl-randist.c +-gsl_randist_LDADD = libgsl.la cblas/libgslcblas.la ++gsl_randist_LDADD = libgsl.la + + gsl_histogram_SOURCES = gsl-histogram.c +-gsl_histogram_LDADD = libgsl.la cblas/libgslcblas.la ++gsl_histogram_LDADD = libgsl.la + + check_SCRIPTS = test_gsl_histogram.sh pkgconfig.test + TESTS = test_gsl_histogram.sh pkgconfig.test +@@ -57,6 +56,8 @@ + -e 's|@GSL_CFLAGS[@]|$(GSL_CFLAGS)|g' \ + -e 's|@GSL_LIBM[@]|$(GSL_LIBM)|g' \ + -e 's|@GSL_LIBS[@]|$(GSL_LIBS)|g' \ ++ -e 's|@CBLAS_CFLAGS[@]|$(CBLAS_CFLAGS)|g' \ ++ -e 's|@CBLAS_LIBS[@]|$(CBLAS_LIBS)|g' \ + -e 's|@LIBS[@]|$(LIBS)|g' \ + -e 's|@VERSION[@]|$(VERSION)|g' + +--- gsl-1.16.orig/multifit/Makefile.am 2013-07-18 06:04:26.000000000 +1000 ++++ gsl-1.16/multifit/Makefile.am 2013-11-22 16:57:26.170330257 +1100 +@@ -13,8 +13,8 @@ + TESTS = $(check_PROGRAMS) + + test_SOURCES = test.c +-test_LDADD = libgslmultifit.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../matrix/libgslmatrix.la ../sort/libgslsort.la ../statistics/libgslstatistics.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../utils/libutils.la ../sys/libgslsys.la ++test_LDADD = libgslmultifit.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../matrix/libgslmatrix.la ../sort/libgslsort.la ../statistics/libgslstatistics.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../utils/libutils.la ../sys/libgslsys.la + + #demo_SOURCES = demo.c +-#demo_LDADD = libgslmultifit.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../randist/libgslrandist.la ../rng/libgslrng.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../utils/libutils.la ../sys/libgslsys.la ++#demo_LDADD = libgslmultifit.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../randist/libgslrandist.la ../rng/libgslrng.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../utils/libutils.la ../sys/libgslsys.la + +diff -Nur gsl-1.16.orig/multimin/Makefile.am gsl-1.16/multimin/Makefile.am +--- gsl-1.16.orig/multimin/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/multimin/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -13,8 +13,8 @@ + TESTS = $(check_PROGRAMS) + + test_SOURCES = test.c test_funcs.c test_funcs.h +-test_LDADD = libgslmultimin.la ../min/libgslmin.la ../poly/libgslpoly.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++test_LDADD = libgslmultimin.la ../min/libgslmin.la ../poly/libgslpoly.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../linalg/libgsllinalg.la ../permutation/libgslpermutation.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + + #demo_SOURCES = demo.c +-#demo_LDADD = libgslmultimin.la ../min/libgslmin.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../linalg/libgsllinalg.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++#demo_LDADD = libgslmultimin.la ../min/libgslmin.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../linalg/libgsllinalg.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + +diff -Nur gsl-1.16.orig/multiroots/Makefile.am gsl-1.16/multiroots/Makefile.am +--- gsl-1.16.orig/multiroots/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/multiroots/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -15,5 +15,5 @@ + TESTS = $(check_PROGRAMS) + + test_SOURCES = test.c test_funcs.c test_funcs.h +-test_LDADD = libgslmultiroots.la ../linalg/libgsllinalg.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../permutation/libgslpermutation.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++test_LDADD = libgslmultiroots.la ../linalg/libgsllinalg.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../permutation/libgslpermutation.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + +diff -Nur gsl-1.16.orig/ode-initval/Makefile.am gsl-1.16/ode-initval/Makefile.am +--- gsl-1.16.orig/ode-initval/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/ode-initval/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -12,7 +12,7 @@ + + TESTS = $(check_PROGRAMS) + +-test_LDADD = libgslodeiv.la ../linalg/libgsllinalg.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../matrix/libgslmatrix.la ../permutation/libgslpermutation.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++test_LDADD = libgslodeiv.la ../linalg/libgsllinalg.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../matrix/libgslmatrix.la ../permutation/libgslpermutation.la ../vector/libgslvector.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + + test_SOURCES = test.c + +diff -Nur gsl-1.16.orig/poly/Makefile.am gsl-1.16/poly/Makefile.am +--- gsl-1.16.orig/poly/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/poly/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -10,7 +10,7 @@ + + TESTS = $(check_PROGRAMS) + +-check_PROGRAMS = test ++#check_PROGRAMS = test + + test_SOURCES = test.c + test_LDADD = libgslpoly.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ../sort/libgslsort.la +diff -Nur gsl-1.16.orig/specfunc/Makefile.am gsl-1.16/specfunc/Makefile.am +--- gsl-1.16.orig/specfunc/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/specfunc/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -12,7 +12,7 @@ + + check_PROGRAMS = test + +-test_LDADD = libgslspecfunc.la ../eigen/libgsleigen.la ../linalg/libgsllinalg.la ../sort/libgslsort.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++test_LDADD = libgslspecfunc.la ../eigen/libgsleigen.la ../linalg/libgsllinalg.la ../sort/libgslsort.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../block/libgslblock.la ../complex/libgslcomplex.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + + test_SOURCES = test_sf.c test_sf.h test_airy.c test_bessel.c test_coulomb.c test_dilog.c test_gamma.c test_hyperg.c test_legendre.c test_mathieu.c + +diff -Nur gsl-1.16.orig/wavelet/Makefile.am gsl-1.16/wavelet/Makefile.am +--- gsl-1.16.orig/wavelet/Makefile.am 2013-07-17 13:04:26.000000000 -0700 ++++ gsl-1.16/wavelet/Makefile.am 2013-08-19 15:25:27.729497736 -0700 +@@ -10,7 +10,7 @@ + + TESTS = $(check_PROGRAMS) + +-test_LDADD = libgslwavelet.la ../blas/libgslblas.la ../cblas/libgslcblas.la ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la ++test_LDADD = libgslwavelet.la ../blas/libgslblas.la @CBLAS_LINK_LIBS@ ../matrix/libgslmatrix.la ../vector/libgslvector.la ../block/libgslblock.la ../ieee-utils/libgslieeeutils.la ../err/libgslerr.la ../test/libgsltest.la ../sys/libgslsys.la ../utils/libutils.la + + test_SOURCES = test.c + diff --git a/sci-libs/gsl/gsl-1.16.ebuild b/sci-libs/gsl/gsl-1.16.ebuild new file mode 100644 index 000000000000..8c2094c2dcdc --- /dev/null +++ b/sci-libs/gsl/gsl-1.16.ebuild @@ -0,0 +1,103 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-libs/gsl/gsl-1.16.ebuild,v 1.1 2014/04/16 13:34:45 hasufell Exp $ + +EAPI=5 + +inherit eutils flag-o-matic autotools toolchain-funcs + +DESCRIPTION="The GNU Scientific Library" +HOMEPAGE="http://www.gnu.org/software/gsl/" +SRC_URI="mirror://gnu/${PN}/${P}.tar.gz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~arm ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sh ~sparc ~x86 ~x86-fbsd ~x86-interix ~amd64-linux ~x86-linux ~x86-macos ~sparc-solaris ~x86-solaris" +IUSE="cblas-external static-libs" + +RDEPEND="cblas-external? ( virtual/cblas )" +DEPEND="${RDEPEND} + app-admin/eselect-cblas + virtual/pkgconfig" + +DOCS=( AUTHORS BUGS ChangeLog NEWS README THANKS TODO ) + +pkg_pretend() { + # prevent to use external cblas from a previously installed gsl + local current_lib + if use cblas-external; then + current_lib=$(eselect cblas show | cut -d' ' -f2) + if [[ ${current_lib} == gsl ]]; then + ewarn "USE flag cblas-external is set: linking gsl with an external cblas." + ewarn "However the current selected external cblas is gsl." + ewarn "Please install and/or eselect another cblas" + die "Circular gsl dependency" + fi + fi +} + +src_prepare() { + ESELECT_PROF="gsl" + + # bug 349005 + [[ $(tc-getCC)$ == *gcc* ]] && \ + [[ $(tc-getCC)$ != *apple* ]] && \ + [[ $(gcc-major-version)$(gcc-minor-version) -eq 44 ]] \ + && filter-mfpmath sse + filter-flags -ffast-math + + epatch "${FILESDIR}"/${P}-cblas.patch + eautoreconf + + cp "${FILESDIR}"/eselect.cblas.gsl "${T}"/ + sed -i -e "s:/usr:${EPREFIX}/usr:" "${T}"/eselect.cblas.gsl || die + if [[ ${CHOST} == *-darwin* ]] ; then + sed -i -e 's/\.so\([\.0-9]\+\)\?/\1.dylib/g' \ + "${T}"/eselect.cblas.gsl || die + fi +} + +src_configure() { + if use cblas-external; then + export CBLAS_LIBS="$($(tc-getPKG_CONFIG) --libs cblas)" + export CBLAS_CFLAGS="$($(tc-getPKG_CONFIG) --cflags cblas)" + fi + econf \ + --enable-shared \ + $(use_with cblas-external) \ + $(use_enable static-libs static) +} + +src_install() { + default + + find "${ED}" -name '*.la' -exec rm -f {} + + + # take care of pkgconfig file for cblas implementation. + sed -e "s/@LIBDIR@/$(get_libdir)/" \ + -e "s/@PV@/${PV}/" \ + -e "/^prefix=/s:=:=${EPREFIX}:" \ + -e "/^libdir=/s:=:=${EPREFIX}:" \ + "${FILESDIR}"/cblas.pc.in > cblas.pc \ + || die "sed cblas.pc failed" + insinto /usr/$(get_libdir)/blas/gsl + doins cblas.pc || die "installing cblas.pc failed" + eselect cblas add $(get_libdir) "${T}"/eselect.cblas.gsl \ + ${ESELECT_PROF} +} + +pkg_postinst() { + local p=cblas + local current_lib=$(eselect ${p} show | cut -d' ' -f2) + if [[ ${current_lib} == ${ESELECT_PROF} || -z ${current_lib} ]]; then + # work around eselect bug #189942 + local configfile="${EROOT}"/etc/env.d/${p}/$(get_libdir)/config + [[ -e ${configfile} ]] && rm -f ${configfile} + eselect ${p} set ${ESELECT_PROF} + elog "${p} has been eselected to ${ESELECT_PROF}" + else + elog "Current eselected ${p} is ${current_lib}" + elog "To use ${p} ${ESELECT_PROF} implementation, you have to issue (as root):" + elog "\t eselect ${p} set ${ESELECT_PROF}" + fi +} |