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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2009-11-20 19:02:25 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-11-20 19:02:25 +0000 |
| commit | 7a0e922acbcb6d184b6431e44ffe0ab5aeaebb17 (patch) | |
| tree | 0321eb22be2c07e838aed6960d1398af8769b191 /sci-biology | |
| parent | Drop arts support in kde.eclass (diff) | |
| download | gentoo-2-7a0e922acbcb6d184b6431e44ffe0ab5aeaebb17.tar.gz gentoo-2-7a0e922acbcb6d184b6431e44ffe0ab5aeaebb17.tar.bz2 gentoo-2-7a0e922acbcb6d184b6431e44ffe0ab5aeaebb17.zip | |
New package, ebuild written by me
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/mosaik/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/mosaik/metadata.xml | 9 | ||||
| -rw-r--r-- | sci-biology/mosaik/mosaik-1.0.1367.ebuild | 34 |
3 files changed, 53 insertions, 0 deletions
diff --git a/sci-biology/mosaik/ChangeLog b/sci-biology/mosaik/ChangeLog new file mode 100644 index 000000000000..269f25da0eeb --- /dev/null +++ b/sci-biology/mosaik/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/mosaik +# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/ChangeLog,v 1.1 2009/11/20 19:02:25 weaver Exp $ + +*mosaik-1.0.1367 (20 Nov 2009) + + 20 Nov 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml, + +mosaik-1.0.1367.ebuild: + New package, ebuild written by me + diff --git a/sci-biology/mosaik/metadata.xml b/sci-biology/mosaik/metadata.xml new file mode 100644 index 000000000000..3302123e5718 --- /dev/null +++ b/sci-biology/mosaik/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> diff --git a/sci-biology/mosaik/mosaik-1.0.1367.ebuild b/sci-biology/mosaik/mosaik-1.0.1367.ebuild new file mode 100644 index 000000000000..b86d8d5ef546 --- /dev/null +++ b/sci-biology/mosaik/mosaik-1.0.1367.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/mosaik-1.0.1367.ebuild,v 1.1 2009/11/20 19:02:25 weaver Exp $ + +EAPI="2" + +DESCRIPTION="A reference-guided aligner for next-generation sequencing technologies" +HOMEPAGE="http://code.google.com/p/mosaik-aligner/" +SRC_URI="http://mosaik-aligner.googlecode.com/files/Mosaik-${PV}-source.tar.bz2" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/${PN}-source" + +src_compile() { + emake -C src || die +# emake -C MosaikTools/c++ || die +# emake -C MosaikTools/perl || die +} + +src_install() { + dobin bin/* || die + + insinto /usr/share/${PN} + doins -r MosaikTools || die + + dodoc README Mosaik-1.0-Documentation.pdf +} |