diff options
author | Olivier Fisette <ribosome@gentoo.org> | 2005-06-03 05:04:34 +0000 |
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committer | Olivier Fisette <ribosome@gentoo.org> | 2005-06-03 05:04:34 +0000 |
commit | d09bb5b39de09c34ee684f549a8ec40b7ae56ac4 (patch) | |
tree | ea57a96f8502b21195d09118e6561b39d3a83ba5 /sci-biology | |
parent | header fix (diff) | |
download | gentoo-2-d09bb5b39de09c34ee684f549a8ec40b7ae56ac4.tar.gz gentoo-2-d09bb5b39de09c34ee684f549a8ec40b7ae56ac4.tar.bz2 gentoo-2-d09bb5b39de09c34ee684f549a8ec40b7ae56ac4.zip |
New version. Added 505 to x86.
(Portage version: 2.0.51.19)
Diffstat (limited to 'sci-biology')
-rw-r--r-- | sci-biology/rebase/ChangeLog | 8 | ||||
-rw-r--r-- | sci-biology/rebase/Manifest | 10 | ||||
-rw-r--r-- | sci-biology/rebase/files/digest-rebase-506 | 1 | ||||
-rw-r--r-- | sci-biology/rebase/rebase-505.ebuild | 4 | ||||
-rw-r--r-- | sci-biology/rebase/rebase-506.ebuild | 39 |
5 files changed, 55 insertions, 7 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 5a96dfd0a1f0..fc9719906aac 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/rebase # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.19 2005/05/31 02:39:40 j4rg0n Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.20 2005/06/03 05:04:34 ribosome Exp $ + +*rebase-506 (03 Jun 2005) + + 03 Jun 2005; Olivier Fisette <ribosome@gentoo.org> rebase-505.ebuild, + +rebase-506.ebuild: + New version. Added 505 to x86. 31 May 2005; Lina Pezzella <j4rg0n@gentoo.org> rebase-504.ebuild: Stable ppc-macos diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index d06c01b372a0..9fbf601d75d9 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,8 +1,10 @@ -MD5 226073d1437f64cda871a6263ee6f363 ChangeLog 3697 -MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900 +MD5 535c1b9a5c039afe12e7c27585f2fd49 rebase-506.ebuild 1105 MD5 5fa95c2f2ad17343c0eb4b6ca755f356 rebase-503.ebuild 1093 +MD5 e480c248b0cb632352c8390be3847b01 rebase-505.ebuild 1104 MD5 09995c6206ec61ffb1b9ab7b1d42b630 rebase-504.ebuild 1101 -MD5 535c1b9a5c039afe12e7c27585f2fd49 rebase-505.ebuild 1105 -MD5 d6f28d28944c2a7a89f538b5e2f6ca59 files/digest-rebase-504 63 +MD5 d5c8e94559f922a45d8a24bd01dea11e ChangeLog 3852 +MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900 MD5 4dadc55666a0a297406ac775307bfc29 files/digest-rebase-503 63 +MD5 d6f28d28944c2a7a89f538b5e2f6ca59 files/digest-rebase-504 63 MD5 ea8e6db2f49c76188695eded7e22ea33 files/digest-rebase-505 63 +MD5 9db4b0bbf4fd2bfaf23f3434ac71e8f5 files/digest-rebase-506 63 diff --git a/sci-biology/rebase/files/digest-rebase-506 b/sci-biology/rebase/files/digest-rebase-506 new file mode 100644 index 000000000000..facaa8432676 --- /dev/null +++ b/sci-biology/rebase/files/digest-rebase-506 @@ -0,0 +1 @@ +MD5 b404ccb65575b61ff3bd555b02fc2647 rebase-506.tar.bz2 179395 diff --git a/sci-biology/rebase/rebase-505.ebuild b/sci-biology/rebase/rebase-505.ebuild index 331ebaa47b6d..96864a471d63 100644 --- a/sci-biology/rebase/rebase-505.ebuild +++ b/sci-biology/rebase/rebase-505.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2005 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-505.ebuild,v 1.1 2005/05/10 02:00:37 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-505.ebuild,v 1.2 2005/06/03 05:04:34 ribosome Exp $ DESCRIPTION="A restriction enzyme database" HOMEPAGE="http://rebase.neb.com" @@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2" LICENSE="public-domain" SLOT="0" -KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64" +KEYWORDS="x86 ~ppc ~amd64 ~ppc-macos ~ppc64" IUSE="emboss minimal" # Minimal build keeps only the indexed files (if applicable) and the documentation. # The non-indexed database is not installed. diff --git a/sci-biology/rebase/rebase-506.ebuild b/sci-biology/rebase/rebase-506.ebuild new file mode 100644 index 000000000000..eb45926e8fbf --- /dev/null +++ b/sci-biology/rebase/rebase-506.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2005 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-506.ebuild,v 1.1 2005/06/03 05:04:34 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64" +IUSE="emboss minimal" +# Minimal build keeps only the indexed files (if applicable) and the documentation. +# The non-indexed database is not installed. + +DEPEND="emboss? ( sci-biology/emboss )" + +src_compile() { + if use emboss; then + echo + einfo "Indexing ${PN} for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/{embossre.enz,embossre.ref,embossre.sup} + fi +} |