Version bump, remove old

(Portage version: 2.2_rc30/cvs/Linux x86_64)

4 files changed, 12 insertions, 85 deletions

diff --git a/sci-biology/velvet/ChangeLog b/sci-biology/velvet/ChangeLog
index f31ffa15e7ce..f5dc38578daa 100644
--- a/sci-biology/velvet/ChangeLog
+++ b/sci-biology/velvet/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/velvet
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/velvet/ChangeLog,v 1.4 2009/07/27 20:30:59 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/velvet/ChangeLog,v 1.5 2009/08/20 15:18:27 weaver Exp $
+
+*velvet-0.7.50 (20 Aug 2009)
+
+  20 Aug 2009; Andrey Kislyuk <weaver@gentoo.org> -velvet-0.7.31.ebuild,
+  -velvet-0.7.34.ebuild, -velvet-0.7.42.ebuild, +velvet-0.7.50.ebuild:
+  Version bump, remove old
 
 *velvet-0.7.47 (27 Jul 2009)
 
diff --git a/sci-biology/velvet/velvet-0.7.31.ebuild b/sci-biology/velvet/velvet-0.7.31.ebuild
deleted file mode 100644
index 71e80531fd29..000000000000
--- a/sci-biology/velvet/velvet-0.7.31.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/velvet/velvet-0.7.31.ebuild,v 1.1 2009/06/05 10:06:43 weaver Exp $
-
-EAPI="2"
-
-MY_P="${PN}_${PV}"
-
-DESCRIPTION="A sequence assembler for very short reads"
-HOMEPAGE="http://www.ebi.ac.uk/~zerbino/velvet/"
-SRC_URI="http://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-src_prepare() {
-	rm -rf "${S}"/third-party/zlib*
-	sed -i -e '/\(CFLAGS\|LDFLAGS\|Z_LIB_DIR\|Z_LIB_FILES\) *= */d' \
-		-e '1 a CFLAGS+= -Wall' -e '1 a LDFLAGS+= -lm -lz' \
-		-e '/default :/ s/zlib//' -e '/color :/ s/zlib//' \
-		"${S}"/Makefile || die
-	sed -i -e '/zlib.h/d' -e '1 i #include <zlib.h>' "${S}"/src/readSet.c || die
-}
-
-src_compile() {
-	emake -j1 || die
-	emake -j1 color || die
-}
-
-src_install() {
-	dobin velvet{g,h,g_de,h_de} third-party/layout/graph2.py third-party/afg_handling/*.pl || die
-	dodoc Manual.pdf CREDITS.txt
-}
diff --git a/sci-biology/velvet/velvet-0.7.34.ebuild b/sci-biology/velvet/velvet-0.7.34.ebuild
deleted file mode 100644
index 1caac6c8fcc8..000000000000
--- a/sci-biology/velvet/velvet-0.7.34.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/velvet/velvet-0.7.34.ebuild,v 1.1 2009/06/21 14:49:00 weaver Exp $
-
-EAPI="2"
-
-MY_P="${PN}_${PV}"
-
-DESCRIPTION="A sequence assembler for very short reads"
-HOMEPAGE="http://www.ebi.ac.uk/~zerbino/velvet/"
-SRC_URI="http://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${MY_P}"
-
-src_prepare() {
-	rm -rf "${S}"/third-party/zlib*
-	sed -i -e '/\(CFLAGS\|LDFLAGS\|Z_LIB_DIR\|Z_LIB_FILES\) *= */d' \
-		-e '1 a CFLAGS+= -Wall' -e '1 a LDFLAGS+= -lm -lz' \
-		-e '/default :/ s/zlib//' -e '/color :/ s/zlib//' \
-		"${S}"/Makefile || die
-	sed -i -e '/zlib.h/d' -e '1 i #include <zlib.h>' "${S}"/src/readSet.c || die
-}
-
-src_compile() {
-	emake -j1 || die
-	emake -j1 color || die
-}
-
-src_install() {
-	dobin velvet{g,h,g_de,h_de} third-party/layout/graph2.py third-party/afg_handling/*.pl || die
-	dodoc Manual.pdf CREDITS.txt
-}
diff --git a/sci-biology/velvet/velvet-0.7.42.ebuild b/sci-biology/velvet/velvet-0.7.50.ebuild
index 3cbe310605d3..7143d138e84f 100644
--- a/sci-biology/velvet/velvet-0.7.42.ebuild
+++ b/sci-biology/velvet/velvet-0.7.50.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2009 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/velvet/velvet-0.7.42.ebuild,v 1.1 2009/07/08 04:12:05 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/velvet/velvet-0.7.50.ebuild,v 1.1 2009/08/20 15:18:27 weaver Exp $
 
 EAPI="2"
 
@@ -12,11 +12,11 @@ SRC_URI="http://www.ebi.ac.uk/~zerbino/velvet/${MY_P}.tgz"
 
 LICENSE="GPL-2"
 SLOT="0"
-IUSE=""
+IUSE="-doc"
 KEYWORDS="~amd64 ~x86"
 
-DEPEND=""
-RDEPEND="${DEPEND}"
+DEPEND="doc? ( virtual/latex-base )"
+RDEPEND=""
 
 S="${WORKDIR}/${MY_P}"
 
@@ -26,6 +26,7 @@ src_prepare() {
 		-e '1 a CFLAGS+= -Wall' -e '1 a LDFLAGS+= -lm -lz' \
 		-e '/default :/ s/zlib//' -e '/color :/ s/zlib//' \
 		"${S}"/Makefile || die
+	use doc || sed -i -e '/default :/ s/doc//' "${S}"/Makefile || die
 	sed -i -e '/zlib.h/d' -e '1 i #include <zlib.h>' "${S}"/src/readSet.c || die
 }