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authorDonnie Berkholz <spyderous@gentoo.org>2006-06-04 09:03:48 +0000
committerDonnie Berkholz <spyderous@gentoo.org>2006-06-04 09:03:48 +0000
commit0779dc20f442894c1364a01dd57d1a80bf3abf0c (patch)
tree49aaf379debbdeb2e209e614808589c8d3579fd6 /sci-chemistry
parentAdd license for some sci-chemistry programs from the Richardson lab. (diff)
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New program that evaluates atomic packing within or between molecules.
(Portage version: 2.1_rc3-r1)
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/probe/ChangeLog10
-rw-r--r--sci-chemistry/probe/Manifest16
-rw-r--r--sci-chemistry/probe/files/digest-probe-2.11.0501213
-rw-r--r--sci-chemistry/probe/metadata.xml9
-rw-r--r--sci-chemistry/probe/probe-2.11.050121.ebuild39
5 files changed, 77 insertions, 0 deletions
diff --git a/sci-chemistry/probe/ChangeLog b/sci-chemistry/probe/ChangeLog
new file mode 100644
index 000000000000..6382b84b9a19
--- /dev/null
+++ b/sci-chemistry/probe/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/probe
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/probe/ChangeLog,v 1.1 2006/06/04 09:03:48 spyderous Exp $
+
+*probe-2.11.050121 (04 Jun 2006)
+
+ 04 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ +probe-2.11.050121.ebuild:
+ New program that evaluates atomic packing within or between molecules.
+
diff --git a/sci-chemistry/probe/Manifest b/sci-chemistry/probe/Manifest
new file mode 100644
index 000000000000..fdf515712e7a
--- /dev/null
+++ b/sci-chemistry/probe/Manifest
@@ -0,0 +1,16 @@
+DIST probe.2.11.050121.src.tgz 99403 RMD160 85d65f7c7379e8d4c46fe5c3b19a2d67fc12a32e SHA1 7fd88ec312558b6f2eb0b6da412140cb83e1a9f4 SHA256 c37255142e37df3d59da6be935bd79c799b5e703fc453b3978298617b0c0b278
+EBUILD probe-2.11.050121.ebuild 770 RMD160 9aa70494da86e9cbb9db20b5f97a5b9ac97fc791 SHA1 0c4eac8efe5a6700b6d0f4c380c7a01efe2df491 SHA256 6863c1be811f8a8478f01c8332cbe3825688400a3f4a2e3a6428372f786f4681
+MD5 e7c61fd071615ba178f7a4b330c7ca50 probe-2.11.050121.ebuild 770
+RMD160 9aa70494da86e9cbb9db20b5f97a5b9ac97fc791 probe-2.11.050121.ebuild 770
+SHA256 6863c1be811f8a8478f01c8332cbe3825688400a3f4a2e3a6428372f786f4681 probe-2.11.050121.ebuild 770
+MISC ChangeLog 327 RMD160 315f31431357af121fc1909172878a0ace42254f SHA1 39a9c500c7e06885cd28162e38ecf75f0579ed14 SHA256 5cebf1e21cd66935beedc5afbc41791dd20b9a4a5d42f9d28aa26c9d29dd0601
+MD5 19bf305dfb963ab99d8a9a4b19713d16 ChangeLog 327
+RMD160 315f31431357af121fc1909172878a0ace42254f ChangeLog 327
+SHA256 5cebf1e21cd66935beedc5afbc41791dd20b9a4a5d42f9d28aa26c9d29dd0601 ChangeLog 327
+MISC metadata.xml 248 RMD160 6488d9f1ef3e05e6ac5a29ddcc818e5ead0a5230 SHA1 75a648fddef9922cdfe21fb0298a1c746190fd82 SHA256 de0ad7dc383b462c407cae015684d27c090455eac87c6f0f9ff581ef6e0b5b27
+MD5 af1bfbb0777267a03e889b08173f2757 metadata.xml 248
+RMD160 6488d9f1ef3e05e6ac5a29ddcc818e5ead0a5230 metadata.xml 248
+SHA256 de0ad7dc383b462c407cae015684d27c090455eac87c6f0f9ff581ef6e0b5b27 metadata.xml 248
+MD5 091681e6ead365f203b0220594298eaf files/digest-probe-2.11.050121 253
+RMD160 308331cfd027726bd1616109b652decb976890bd files/digest-probe-2.11.050121 253
+SHA256 0ed5ef49997b64239a50b65d83801042a80689cec0411c8037f549f37e7a3638 files/digest-probe-2.11.050121 253
diff --git a/sci-chemistry/probe/files/digest-probe-2.11.050121 b/sci-chemistry/probe/files/digest-probe-2.11.050121
new file mode 100644
index 000000000000..5a1de7fc974f
--- /dev/null
+++ b/sci-chemistry/probe/files/digest-probe-2.11.050121
@@ -0,0 +1,3 @@
+MD5 b378d4487150aea75d27853226f0b74f probe.2.11.050121.src.tgz 99403
+RMD160 85d65f7c7379e8d4c46fe5c3b19a2d67fc12a32e probe.2.11.050121.src.tgz 99403
+SHA256 c37255142e37df3d59da6be935bd79c799b5e703fc453b3978298617b0c0b278 probe.2.11.050121.src.tgz 99403
diff --git a/sci-chemistry/probe/metadata.xml b/sci-chemistry/probe/metadata.xml
new file mode 100644
index 000000000000..211b8bd0f0a4
--- /dev/null
+++ b/sci-chemistry/probe/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<herd>sci</herd>
+<maintainer>
+<email>spyderous@gentoo.org</email>
+<name>Donnie Berkholz</name>
+</maintainer>
+</pkgmetadata>
diff --git a/sci-chemistry/probe/probe-2.11.050121.ebuild b/sci-chemistry/probe/probe-2.11.050121.ebuild
new file mode 100644
index 000000000000..30caeabfdbb9
--- /dev/null
+++ b/sci-chemistry/probe/probe-2.11.050121.ebuild
@@ -0,0 +1,39 @@
+# Copyright 1999-2006 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/probe/probe-2.11.050121.ebuild,v 1.1 2006/06/04 09:03:48 spyderous Exp $
+
+inherit toolchain-funcs
+
+MY_P="${PN}.${PV}"
+DESCRIPTION="Evaluates atomic packing within or between molecules"
+HOMEPAGE="http://kinemage.biochem.duke.edu/software/probe.php"
+SRC_URI="http://kinemage.biochem.duke.edu/ftpsite/pub/software/probe/${MY_P}.src.tgz"
+LICENSE="richardson"
+SLOT="0"
+KEYWORDS="~ppc ~x86"
+IUSE=""
+RDEPEND=""
+DEPEND="${RDEPEND}"
+S="${WORKDIR}/${MY_P}"
+
+src_unpack() {
+ unpack ${A}
+
+ # Respect CC
+ sed -i \
+ -e 's:cc:$(CC):g' \
+ ${S}/Makefile
+}
+
+src_compile() {
+ emake \
+ CC="$(tc-getCC)" \
+ CFLAGS="${CFLAGS}" \
+ MACHINEFLAGS="${LDFLAGS}" \
+ || die "make failed"
+}
+
+src_install() {
+ dobin ${S}/probe
+ dodoc ${S}/README*
+}