Drop sci-chemistry/pymol-plugins-cealign, included in sci-chemistry/pymol

4 files changed, 0 insertions, 101 deletions

diff --git a/sci-chemistry/pymol-plugins-cealign/ChangeLog b/sci-chemistry/pymol-plugins-cealign/ChangeLog
deleted file mode 100644
index ae5eff67b084..000000000000
--- a/sci-chemistry/pymol-plugins-cealign/ChangeLog
+++ /dev/null
@@ -1,29 +0,0 @@
-# ChangeLog for sci-chemistry/pymol-plugins-cealign
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-cealign/ChangeLog,v 1.7 2010/04/25 11:30:38 jlec Exp $
-
-  22 Feb 2010; Justin Lecher <jlec@gentoo.org>
-  pymol-plugins-cealign-0.9.ebuild:
-  Changed RDEP to <=pymol-1.2.4 per 306239
-
-  21 Feb 2010; Justin Lecher <jlec@gentoo.org>
-  pymol-plugins-cealign-0.9.ebuild:
-  Make it really multiple python version aware
-
-  19 Feb 2010; Justin Lecher <jlec@gentoo.org>
-  pymol-plugins-cealign-0.9.ebuild:
-  Fix for quoting in pymolrc
-
-  19 Feb 2010; Justin Lecher <jlec@gentoo.org>
-  pymol-plugins-cealign-0.9.ebuild:
-  PYMOL_PATH includes EPREFIX, so we should not use it
-
-*pymol-plugins-cealign-0.9 (18 Feb 2010)
-
-  18 Feb 2010; Justin Lecher <jlec@gentoo.org>
-  +pymol-plugins-cealign-0.9.ebuild, +metadata.xml:
-  New addition, for further reading:
-  Shindyalov IN, Bourne PE. Protein structure alignment by incremental
-  combinatorial extension (CE) of the optimal path. Protein Eng. 1998
-  Sep;11(9):739-47. PMID: 9796821 [PubMed - indexed for MEDLINE]
-
diff --git a/sci-chemistry/pymol-plugins-cealign/Manifest b/sci-chemistry/pymol-plugins-cealign/Manifest
deleted file mode 100644
index 9767c3198ce1..000000000000
--- a/sci-chemistry/pymol-plugins-cealign/Manifest
+++ /dev/null
@@ -1,14 +0,0 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
-DIST Cealign-0.9.zip 766905 RMD160 fe7ee7fdcf8a7ca908c69e7de642318b3ec34867 SHA1 c57f8c1b46c192f276b1011f70c032cb7d2d5fb6 SHA256 87eee30c7757daae4baa3451246d813165f2317600da8d7bcde680ba0e822176
-EBUILD pymol-plugins-cealign-0.9.ebuild 1191 RMD160 b3e8b9d184a2a82e35b3307a59c790195748668c SHA1 38ac589740b2200fad6776e4b313eff0d6ca5f1a SHA256 f6e86291cdcaabd7e7359d38f78e4077e051e58cfc079e6ac39c972040b19f2f
-MISC ChangeLog 1136 RMD160 905bafa402d7ac5b6e850226c1ee285ad62d78f4 SHA1 72e735a0ecac36ee1da1cd47750c2a9dd02b5db1 SHA256 3d9a94e092a1efdcec2df382dbce69d1b0a474c0fbe26ee72c3c17ad81ab2651
-MISC metadata.xml 216 RMD160 04a6fc4e2160b439296b52aa97d5b7d83af75508 SHA1 9561c9e6eada6aac9b503407917900529ce703e9 SHA256 24f5c205c2655ef27138c8aa087701626f5b4c666229c9ef7fe814e63ea2e776
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.14 (GNU/Linux)
-
-iEYEARECAAYFAkvUJ+QACgkQgAnW8HDreRbzQQCfeBJhcBCe8va7cn6jBCGOV6lR
-PE8AoJ7/dWbTDPHzdWLxwCm9QF2AMOt3
-=Mfk5
------END PGP SIGNATURE-----
diff --git a/sci-chemistry/pymol-plugins-cealign/metadata.xml b/sci-chemistry/pymol-plugins-cealign/metadata.xml
deleted file mode 100644
index c6856dc7f2cf..000000000000
--- a/sci-chemistry/pymol-plugins-cealign/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci</herd>
-<maintainer>
-  <email>jlec@gentoo.org</email>
-</maintainer>
-</pkgmetadata>
diff --git a/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9.ebuild b/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9.ebuild
deleted file mode 100644
index 8cd5a012c536..000000000000
--- a/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9.ebuild
+++ /dev/null
@@ -1,50 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-cealign/pymol-plugins-cealign-0.9.ebuild,v 1.6 2010/02/22 11:45:46 jlec Exp $
-
-EAPI="3"
-
-SUPPORT_PYTHON_ABIS="1"
-
-inherit distutils
-
-DESCRIPTION="The CE algorithm is a fast and accurate protein structure alignment algorithm."
-HOMEPAGE="http://www.pymolwiki.org/index.php/Cealign"
-SRC_URI="http://www.pymolwiki.org/images/0/03/Cealign-${PV}.zip"
-
-SLOT="0"
-LICENSE="BSD"
-KEYWORDS="~x86 ~amd64 ~amd64-linux"
-IUSE=""
-
-DEPEND="
-	dev-python/numpy
-	<sci-chemistry/pymol-1.2.4"
-RDEPEND=""
-RESTRICT_PYTHON_ABIS="2.4 3.*"
-
-S=${WORKDIR}/cealign-0.9
-
-src_prepare() {
-	python_copy_sources
-}
-
-src_install(){
-	distutils_src_install
-
-	installation() {
-		insinto $(python_get_sitedir)/cealign
-		doins qkabsch.py cealign.py || die
-
-		cat > "${T}"/pymolrc <<- EOF
-		run ${EPREFIX}/$(python_get_sitedir)/cealign/qkabsch.py
-		run ${EPREFIX}/$(python_get_sitedir)/cealign/cealign.py
-		EOF
-
-		insinto $(python_get_sitedir)/pymol
-		doins "${T}"/pymolrc || die
-	}
-	python_execute_function -s installation
-
-	dodoc CHANGES doc/cealign.pdf || die
-}