1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
|
--- src/Foundation/ConfigFile.cc.orig 2008-06-16 18:12:13.000000000 +0000
+++ src/Foundation/ConfigFile.cc 2008-06-16 18:12:28.000000000 +0000
@@ -35,6 +35,8 @@
#include "ConfigFile.hh"
+#include <cstring>
+
//! Constructor
/*! Creates a ConfigFile class. Also loads, parses, and resolves
* variable substitution.
--- src/Foundation/Logger.cc.orig 2008-06-16 18:13:45.000000000 +0000
+++ src/Foundation/Logger.cc 2008-06-16 18:14:03.000000000 +0000
@@ -58,6 +58,8 @@
*/
#include "Logger.hh"
+#include <cstdlib>
+
//! Sets default values for class
/*! Note: Log is disabled until a filter level is set\n
--- src/Foundation/OptionResult.cc.orig 2008-06-16 18:15:41.000000000 +0000
+++ src/Foundation/OptionResult.cc 2008-06-16 18:15:51.000000000 +0000
@@ -9,6 +9,8 @@
//! @brief OptionResult class implementation
#include "OptionResult.hh"
+#include <cstdlib>
+
//! Sets defaults for all results
OptionResult::OptionResult(const std::string & optionHelp)
--- src/Foundation/Options.cc.orig 2008-06-16 18:17:01.000000000 +0000
+++ src/Foundation/Options.cc 2008-06-16 18:17:11.000000000 +0000
@@ -26,6 +26,8 @@
*/
#include "Options.hh"
+#include <cstring>
+
//! Constructor takes command line options in standard argc, argv format
/*! Initializes application name, filespec, and invocation
--- src/Align/missing-reads.cc.orig 2008-06-16 18:22:21.000000000 +0000
+++ src/Align/missing-reads.cc 2008-06-16 18:22:34.000000000 +0000
@@ -9,6 +9,8 @@
#include <vector>
#include <algorithm>
#include <cassert>
+#include <cstring>
+
using namespace std;
const int MAX_LINE = 1000;
--- src/Utils/runAmos.cc.orig 2008-06-16 18:30:30.000000000 +0000
+++ src/Utils/runAmos.cc 2008-06-16 18:30:42.000000000 +0000
@@ -18,6 +18,8 @@
#include <dirent.h>
#include <fcntl.h>
#include <iostream>
+#include <cstdlib>
+
#define MAX_STRING 256 // length of various char*s in file
--- src/bankViewer/HistogramWindow.cc.orig 2008-06-16 18:36:40.000000000 +0000
+++ src/bankViewer/HistogramWindow.cc 2008-06-16 18:37:04.000000000 +0000
@@ -1,6 +1,8 @@
#include "HistogramWindow.hh"
#include "HistogramWidget.hh"
#include "InsertStats.hh"
+#include <cstdlib>
+
#include <qspinbox.h>
#include <qcheckbox.h>
|