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# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-libs/shogun/shogun-3.2.0.ebuild,v 1.3 2015/01/27 14:41:32 jlec Exp $
EAPI=5
PYTHON_COMPAT=( python2_7 python3_{3,4} )
inherit cmake-utils multilib python-single-r1 toolchain-funcs versionator
MYPV=$(get_version_component_range 1-2)
MYPD=${PN}-data-0.8
DESCRIPTION="Large Scale Machine Learning Toolbox"
HOMEPAGE="http://shogun-toolbox.org/"
SRC_URI="
ftp://shogun-toolbox.org/shogun/releases/${MYPV}/sources/${P}.tar.bz2
test? ( ftp://shogun-toolbox.org/shogun/data/${MYPD}.tar.bz2 )
examples? ( ftp://shogun-toolbox.org/shogun/data/${MYPD}.tar.bz2 )"
LICENSE="GPL-3 free-noncomm"
SLOT="0/16"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="doc examples lua mono octave python R ruby static-libs test"
REQUIRED_USE="
python? ( ${PYTHON_REQUIRED_USE} )
test? ( python )
"
RDEPEND="
app-arch/bzip2:=
app-arch/gzip:=
app-arch/lzma:=
app-arch/snappy:=
dev-libs/lzo:=
>=dev-cpp/eigen-3.1
dev-libs/json-c:=
dev-libs/libxml2:=
dev-libs/protobuf:=
net-misc/curl:=
sci-libs/arpack:=
sci-libs/arprec:=
sci-libs/colpack:=
sci-libs/hdf5:=
sci-libs/nlopt:=
sci-mathematics/glpk:=
sci-mathematics/lpsolve:=
sys-libs/readline
sys-libs/zlib:=
virtual/blas
virtual/cblas
virtual/lapack
lua? ( dev-lang/lua )
mono? ( dev-lang/mono )
octave? ( sci-mathematics/octave[hdf5] )
python? ( dev-python/numpy[${PYTHON_USEDEP}] )
R? ( dev-lang/R )
ruby? ( dev-ruby/narray )"
DEPEND="${RDEPEND}
virtual/pkgconfig
doc? ( app-doc/doxygen[dot] )
lua? ( >=dev-lang/swig-2.0.4 )
mono? ( >=dev-lang/swig-2.0.4 )
octave? ( >=dev-lang/swig-2.0.4 )
python? ( >=dev-lang/swig-2.0.4 test? ( sci-libs/scipy ) )
R? ( >=dev-lang/swig-2.0.4 )
ruby? ( >=dev-lang/swig-2.0.4 )
test? (
dev-python/jinja[${PYTHON_USEDEP}]
dev-cpp/gmock
)"
# javamodular needs jblas (painful to package properly)
# permodular work in progress (as 3.2.0)
# could actually support multiple pythons, multiple rubys
# feel free to do work for it
PATCHES=(
"${FILESDIR}"/${P}-atlas.patch
)
pkg_setup() {
use python && python-single-r1_pkg_setup
}
src_configure() {
export ATLAS_LIBRARY="$($(tc-getPKG_CONFIG) --libs cblas lapack)"
export CBLAS_LIBRARY="$($(tc-getPKG_CONFIG) --libs cblas)"
export ATLAS_LIBRARIES="$($(tc-getPKG_CONFIG) --libs blas cblas lapack)"
export LAPACK_LIBRARIES="$($(tc-getPKG_CONFIG) --libs lapack)"
local mycmakeargs=(
-DBUILD_EXAMPLES=OFF
-DBUNDLE_ARPREC=OFF
-DBUNDLE_COLPACK=OFF
-DBUNDLE_EIGEN=OFF
-DBUNDLE_JSON=OFF
-DBUNDLE_NLOPT=OFF
-DENABLE_COVERAGE=OFF
-DJavaModular=OFF
-DPerlModular=OFF
-DLIB_INSTALL_DIR=$(get_libdir)
$(cmake-utils_use lua LuaModular)
$(cmake-utils_use mono CSharpModular)
$(cmake-utils_use octave OctaveModular)
$(cmake-utils_use octave OctaveStatic)
$(cmake-utils_use python PythonModular)
$(cmake-utils_use python PythonStatic)
$(cmake-utils_use R RModular)
$(cmake-utils_use R RStatic)
$(cmake-utils_use ruby RubyModular)
$(cmake-utils_use test ENABLE_TESTING)
)
cmake-utils_src_configure
# gentoo bug #302621
has_version sci-libs/hdf5[mpi] && export CXX=mpicxx CC=mpicc
}
src_compile() {
cmake-utils_src_compile
use doc && emake -C doc
}
src_install() {
cmake-utils_src_install
use doc && dohtml -r doc/html/*
if use examples; then
insinto /usr/share/doc/${PF}
emake -C examples clean
doins -r examples
docompress -x /usr/share/doc/${PF}/examples
insinto /usr/share/doc/${PF}/data
doins -r "${WORKDIR}"/${MYPD}/*
fi
}
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