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authorHorea Christian <chr@chymera.eu>2020-12-07 15:09:51 -0500
committerHorea Christian <chr@chymera.eu>2020-12-07 15:09:51 -0500
commit3c90683a0ac9c21953cfa61ff00564dace91c4fa (patch)
tree953c02822d4ae00b5cb75f4d5e16f712cdd8557d /sci-biology/ants
parentsci-libs/spyking-circus: version bump and fix dependencies (diff)
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sci-biology/ants: removed version with unavailable distfiles
Package-Manager: Portage-3.0.11, Repoman-3.0.2 Signed-off-by: Horea Christian <chr@chymera.eu>
Diffstat (limited to 'sci-biology/ants')
-rw-r--r--sci-biology/ants/Manifest1
-rw-r--r--sci-biology/ants/ants-2.3.1_p20191013.ebuild72
2 files changed, 0 insertions, 73 deletions
diff --git a/sci-biology/ants/Manifest b/sci-biology/ants/Manifest
index 6e36e41fc..867a142eb 100644
--- a/sci-biology/ants/Manifest
+++ b/sci-biology/ants/Manifest
@@ -1,3 +1,2 @@
DIST ants-2.3.4.tar.gz 2455843 BLAKE2B c00a2d3edebc0a121fa3b6618982c64fd986db9ea6aed1a1b2c7ced2f77ab154837a47e5bcb01f432b937160de2248b30a2bb7b526952852946e686858334e12 SHA512 084161505671a19530bec40c8209a67510d7de6e9d5afd151b806755ca703dadbea17c0a8d5c6472c7a81185821e17213ebf1488bc0325bfe858af783e8e6575
-DIST ants_testdata-2.3.1_p20191013.tar.xz 25056144 BLAKE2B 7e7535fbe6d7c2e2e0635782b4678fd2cab072ae629cafb361d21291d5b68de086c31f555e1a2008e112601d7c61713461c27e3ac0a1732e7c14c88f73e89781 SHA512 5a636f11952355be3c85d4a36faa84409bace15a7fcd675b20bc8eee83f1969773f6fe5cde31cb7c46bd1baeca21dc8324b1007e6126717f1653bdeb906c8e50
DIST ants_testdata-2.3.4.tar.xz 25056552 BLAKE2B 6478ffe0c98fd3700a6de201f1271339276b45b461b02d4753acdcd1335c83196aa2ed89a89b5b4b0b3df33026f77b231ba1418c9eb7a2380356d4e224f9b310 SHA512 a266fbf2de0003ee689a9369c424c97c92cdf7e4d08ba713623948276d96c9f0f02ab14480c329f462db0059217138680bfe39654f9ec4ac99bf947f51da853d
diff --git a/sci-biology/ants/ants-2.3.1_p20191013.ebuild b/sci-biology/ants/ants-2.3.1_p20191013.ebuild
deleted file mode 100644
index aefec8e10..000000000
--- a/sci-biology/ants/ants-2.3.1_p20191013.ebuild
+++ /dev/null
@@ -1,72 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-CMAKE_MAKEFILE_GENERATOR="emake"
-
-inherit cmake git-r3 multilib
-
-DESCRIPTION="Advanced Normalitazion Tools for neuroimaging"
-HOMEPAGE="http://stnava.github.io/ANTs/"
-SRC_URI="
- test? (
- http://chymera.eu/distfiles/ants_testdata-${PV}.tar.xz
- )
-"
-EGIT_REPO_URI="https://github.com/stnava/ANTs.git"
-EGIT_COMMIT="f78b2d4a382d3090230641b5ade5da28962dad04"
-
-SLOT="0"
-LICENSE="BSD"
-KEYWORDS="~amd64 ~x86"
-IUSE="test vtk"
-
-DEPEND="
- vtk? (
- ~sci-libs/itk-5.0.1[vtkglue]
- sci-libs/vtk
- )
- !vtk? ( ~sci-libs/itk-5.0.1 )
-"
-RDEPEND="${DEPEND}"
-
-PATCHES=(
- "${FILESDIR}/${P}-logic.patch"
- "${FILESDIR}/${P}-paths.patch"
-)
-
-src_unpack() {
- git-r3_src_unpack
- if use test; then
- mkdir -p "${S}/.ExternalData/MD5" || die "Could not create test data directory."
- tar xvf "${DISTDIR}/ants_testdata-${PV}.tar.xz" -C "${S}/.ExternalData/MD5/" > /dev/null || die "Could not unpack test data."
- fi
-}
-
-src_configure() {
- local mycmakeargs=(
- -DUSE_SYSTEM_ITK=ON
- -DITK_DIR="${EPREFIX}/usr/include/ITK-5.0/"
- -DBUILD_TESTING="$(usex test ON OFF)"
- -DUSE_VTK=$(usex vtk ON OFF)
- -DUSE_SYSTEM_VTK=$(usex vtk ON OFF)
- )
- use vtk && mycmakeargs+=(
- -DVTK_DIR="${EPREFIX}/usr/include/vtk-8.1/"
- )
- use test && mycmakeargs+=(
- -DExternalData_OBJECT_STORES="${S}/.ExternalData/MD5"
- )
- cmake-utils_src_configure
-}
-
-src_install() {
- BUILD_DIR="${WORKDIR}/${P}_build/ANTS-build"
- cmake-utils_src_install
- cd "${WORKDIR}/${P}/Scripts" || die "scripts dir not found"
- dobin *.sh
- dodir /usr/$(get_libdir)/ants
- install -t "${D}"/usr/$(get_libdir)/ants * || die
- doenvd "${FILESDIR}"/99ants
-}