diff options
| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-02-24 23:37:13 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-02-24 23:37:13 +0100 |
| commit | 5fd2d15989cb1eb99579c0679c16772620be122f (patch) | |
| tree | 26924bc0c1bdc3174c74639b65dc6b02908a32e7 /sci-biology/fastqc | |
| parent | sci-physics/root/: remove old (diff) | |
| download | sci-5fd2d15989cb1eb99579c0679c16772620be122f.tar.gz sci-5fd2d15989cb1eb99579c0679c16772620be122f.tar.bz2 sci-5fd2d15989cb1eb99579c0679c16772620be122f.zip | |
version bump; still missing src_compile() logic
Package-Manager: portage-2.2.15
Diffstat (limited to 'sci-biology/fastqc')
| -rw-r--r-- | sci-biology/fastqc/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/fastqc/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/fastqc/fastqc-0.11.2.ebuild (renamed from sci-biology/fastqc/fastqc-0.10.1.ebuild) | 7 |
3 files changed, 12 insertions, 5 deletions
diff --git a/sci-biology/fastqc/ChangeLog b/sci-biology/fastqc/ChangeLog index 42bae79d9..6b6cbf580 100644 --- a/sci-biology/fastqc/ChangeLog +++ b/sci-biology/fastqc/ChangeLog @@ -1,7 +1,13 @@ # ChangeLog for sci-biology/fastqc -# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ +*fastqc-0.11.2 (24 Feb 2015) + + 24 Feb 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> + +fastqc-0.11.2.ebuild, -fastqc-0.10.1.ebuild: + version bump; still missing src_compile() logic + 16 Sep 2014; Christoph Junghans <ottxor@gentoo.org> fastqc-0.10.1.ebuild: clean up diff --git a/sci-biology/fastqc/Manifest b/sci-biology/fastqc/Manifest index 401fb1828..c8dd062ca 100644 --- a/sci-biology/fastqc/Manifest +++ b/sci-biology/fastqc/Manifest @@ -1 +1 @@ -DIST fastqc_v0.10.1_source.zip 605722 SHA256 5e7a731c9a21c6b50604db8bb43396e772a7665219ab03a5574a662c24169b88 SHA512 e344043fe9faeb02136d5df2827a1e9609752eb95f5a4b6bc4ac42f5110eb06d3ed74de5b3a2973ba6f17f79f7bb0299c2f754bcace00d8faf6ad549a3245358 WHIRLPOOL ee18a410fed681ff0a6a855f5a56fdab5417f11f59b43d1b47590e5ad40e17e7909aa25388b547379b44775560e94afa4f9890a546e5ab1836b14cdadba3dfc3 +DIST fastqc_v0.11.2_source.zip 996798 SHA256 efee48358830f5120b5a39311d5f50352b1476e89bf5ea4ad6ce1ab831ee7eee SHA512 c0443d7b8313b488090832c7697662d6fccbe8bddf42d7941bb8a3f50e55c104cfa06e2edbd0e04c5fc5de02eadd61830ceddf2c944228a1ce9479d846a750b3 WHIRLPOOL 2aeae03c18595a7a56b88f353b2490d7a826aa7130451e3fc05faf111c1aeea67f5ea617225cedc1d11172ee5c3f823b1f0793278ef5910b8bec00468de76ce9 diff --git a/sci-biology/fastqc/fastqc-0.10.1.ebuild b/sci-biology/fastqc/fastqc-0.11.2.ebuild index 3e2b63954..b6082662e 100644 --- a/sci-biology/fastqc/fastqc-0.10.1.ebuild +++ b/sci-biology/fastqc/fastqc-0.11.2.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2014 Gentoo Foundation +# Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: $ @@ -16,13 +16,14 @@ KEYWORDS="" IUSE="" DEPEND="sci-biology/picard - >=virtual/jrei-1.6" + >=virtual/jre-1.5" RDEPEND="${DEPEND}" S="${WORKDIR}"/FastQC src_install(){ - dobin fastqc + dobin fastqc run_fastqc.bat + dodoc README.txt RELEASE_NOTES.txt # TODO: need to compile java in uk/ac/babraham/FastQC/ # and decide whether jbzip2-0.9.jar is a standard java lib or not |