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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-02-02 21:51:29 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2015-02-02 21:51:29 +0100 |
| commit | f7197b7ce3f627083bdac70048b0711968472b49 (patch) | |
| tree | 7fd6c54cb78c76ad859b41d0328da97268e99c5b /sci-biology/tagdust | |
| parent | sci-libs/acml/acml-6.1.0.3: Version bump (diff) | |
| download | sci-f7197b7ce3f627083bdac70048b0711968472b49.tar.gz sci-f7197b7ce3f627083bdac70048b0711968472b49.tar.bz2 sci-f7197b7ce3f627083bdac70048b0711968472b49.zip | |
sci-biology/tagdust: new package
Package-Manager: portage-2.2.15
Diffstat (limited to 'sci-biology/tagdust')
| -rw-r--r-- | sci-biology/tagdust/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/tagdust/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/tagdust/metadata.xml | 9 | ||||
| -rw-r--r-- | sci-biology/tagdust/tagdust-20101028.ebuild | 33 |
4 files changed, 52 insertions, 0 deletions
diff --git a/sci-biology/tagdust/ChangeLog b/sci-biology/tagdust/ChangeLog new file mode 100644 index 000000000..8d2d81305 --- /dev/null +++ b/sci-biology/tagdust/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/tagdust +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*tagdust-20101028 (02 Feb 2015) + + 02 Feb 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> +metadata.xml, + +tagdust-20101028.ebuild: + sci-biology/tagdust: new package diff --git a/sci-biology/tagdust/Manifest b/sci-biology/tagdust/Manifest new file mode 100644 index 000000000..f6928f006 --- /dev/null +++ b/sci-biology/tagdust/Manifest @@ -0,0 +1 @@ +DIST tagdust.tgz 313456 SHA256 2885523a4b74d531e1db269d667f2195281202ea352a20c0e5f29f9610c1fd1d SHA512 c792c241e702a33d851f0897b98494277441247973df84e90c1ac730b75a656d147960dc5619ba78a8e4f87953c64d9ce0067cbb83c0b19438bf4889b07a2c36 WHIRLPOOL 559e9650b24a3dddd86fec62deae234d8c87d950db18aa44b9aae57c0ba052a2fc66d40b4ca56b85bc0fa902a3e42d459ee310df158a45fe631e2b0fe1150cbe diff --git a/sci-biology/tagdust/metadata.xml b/sci-biology/tagdust/metadata.xml new file mode 100644 index 000000000..2bc893037 --- /dev/null +++ b/sci-biology/tagdust/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/tagdust/tagdust-20101028.ebuild b/sci-biology/tagdust/tagdust-20101028.ebuild new file mode 100644 index 000000000..b9e086299 --- /dev/null +++ b/sci-biology/tagdust/tagdust-20101028.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Trim multimers of various primers/adapter from Illumina datasets" +HOMEPAGE="http://genome.gsc.riken.jp/osc/english/dataresource" +SRC_URI="http://genome.gsc.riken.jp/osc/english/software/src/tagdust.tgz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/tagdust + +src_prepare(){ + sed -e "s/^CFLAGS/#CFLAGS/" -e "s#/usr/local/bin#\$(DESTDIR)/usr/bin#" \ + -e "s#/usr/share/man/#\$(DESTDIR)/usr/share/man/#" -i Makefile +} + +src_install(){ + doman tagdust.1 + dobin tagdust + insinto /usr/share/tagdust/Illumina + doins "test/"solexa*.fa + insinto /usr/share/tagdust + doins "test/"protocol.txt README +} |