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path: root/sci-biology
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* sci-biology/blat: -fno-common fixDavid Denoncin2020-07-042-2/+16
* */*: drop last-rited py2 packagesAaron Bauman2020-07-035-227/+0
* sci-biology/wgs-assembler: [QA] Pass CC/CXX to build systemDavid Seifert2020-06-212-54/+76
* sci-biology/vienna-rna: Remove oldDavid Seifert2020-06-214-149/+0
* sci-biology/infernal: [QA] Pass AR to build systemDavid Seifert2020-06-215-68/+142
* sci-biology/poa: [QA] Pass AR/RANLIB to build systemDavid Seifert2020-06-212-23/+34
* sci-biology/poa: Fix building against GCC 10David Seifert2020-06-212-0/+14
* sci-biology/abyss: switch from virtual/libffiSergei Trofimovich2020-06-211-1/+1
* sci-biology/mcl: Fix building against GCC 10David Seifert2020-06-212-5/+31
* sci-biology/mcl: [QA] Call AM_PROG_ARDavid Seifert2020-06-212-9/+59
* sci-biology/abyss: drop oldSergei Trofimovich2020-06-213-110/+0
* sci-biology/abyss: disable CFLAGS QA check on samtobreakSergei Trofimovich2020-05-251-0/+8
* sci-biology/abyss: respect AR override, bug #725300Sergei Trofimovich2020-05-252-0/+67
* sci-biology/bioruby: remove masked packageHans de Graaff2020-05-234-54/+0
* sci-biology/clustalx: EAPI-7 bump, update HOMEPAGEAndreas Sturmlechner2020-05-211-4/+4
* sci-biology/foldingathome: bump to 7.6.13Ian Stakenvicius2020-05-142-1/+1
* sci-biology/foldingathome: migrate to eapi7Ian Stakenvicius2020-04-241-3/+3
* sci-biology/foldingathome: version bumpIan Stakenvicius2020-04-242-0/+141
* sci-biology/mafft: Remove oldDavid Seifert2020-04-224-343/+0
* sci-biology/mafft: Fix -fno-common / GCC 10David Seifert2020-04-222-1/+10
* sci-biology/kallisto: drop inactive maintainerJoonas Niilola2020-04-141-8/+0
* sci-biology/STAR: remove inactive maintainerJoonas Niilola2020-04-141-8/+0
* sci-biology/bcftools: remove inactive maintainerJoonas Niilola2020-04-141-4/+0
* sci-biology/bedtools: remove inactive maintainer & long desc.Joonas Niilola2020-04-141-11/+0
* sci-biology/bamtools: remove inactive maintainerJoonas Niilola2020-04-141-8/+0
* sci-biology/HTSeq: remove inactive maintainerJoonas Niilola2020-04-141-8/+0
* sci-biology/foldingathome: revbump due to RDEPEND changeJoonas Niilola2020-03-281-0/+0
* sci-biology/foldingathome: systemd cleanup, various fixes.Brian Harring2020-03-281-7/+13
* sci-biology/foldingathome: revert init fixJoonas Niilola2020-03-271-2/+2
* sci-biology/samtools: Remove python dependencyDavid Seifert2020-03-271-11/+8
* sci-biology/bcftools: Add python 3.7David Seifert2020-03-271-1/+1
* sci-biology/foldingathome: attempt to fix init and service filesJoonas Niilola2020-03-271-4/+4
* sci-biology/clustalw: Drop alpha keywordsMatt Turner2020-03-151-1/+1
* sci-biology/foldingathome: add enewgroupIan Stakenvicius2020-03-041-1/+2
* sci-biology/tophat: remove last-rited packageMikle Kolyada2020-02-286-310/+0
* sci-biology/qrna: Port to EAPI 7David Seifert2020-02-232-14/+358
* sci-biology/tophat: [QA] inherit eutils.eclass directlyDavid Seifert2020-02-161-1/+1
* sci-biology/poa: [QA] inherit toolchain-funcs.eclass directlyDavid Seifert2020-02-131-2/+2
* */*: Bump copyright on files touched this yearMichał Górny2020-02-111-1/+1
* sci-biology/pysam: Remove py2Michał Górny2020-02-111-1/+1
* sci-biology/bedtools: Remove py2 where possibleMichał Górny2020-02-101-1/+1
* sci-biology/tophat: Switch to PYTHON_MULTI_USEDEP APIMichał Górny2020-02-091-3/+5
* sci-biology/bcftools: Switch to PYTHON_MULTI_USEDEP APIMichał Górny2020-02-091-1/+3
* sci-biology/bcftools: fix PYTHON_COMPAT, add missing matplotlib depMartin Mokrejs2020-02-072-4/+14
* */*: Drop stable alpha keywordsMatt Turner2020-01-251-1/+1
* sci-biology/bwa: Fix -fno-common bugDavid Seifert2020-01-252-4/+13
* sci-biology/HTSeq: Remove Python 2Michał Górny2020-01-162-2/+2
* sci-biology/biopandas: Remove Python 2Michał Górny2020-01-161-1/+1
* */*: Switch sci-biology proj to cmake.eclassAndreas Sturmlechner2020-01-052-6/+6
* */*: Clean PYTHON_COMPAT of obsolete implsMichał Górny2020-01-056-12/+12