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Description: Proper type-casting in using seqan::_setBegin().
Required by newer versions of GCC.
Forwarded: no
Author: Ognyan Kulev <ogi@debian.org>
Last-Update: 2013-04-18
--- a/pat.h
+++ b/pat.h
@@ -82,20 +82,20 @@ struct ReadBuf {
~ReadBuf() {
clearAll(); reset();
// Prevent seqan from trying to free buffers
- _setBegin(patFw, NULL);
- _setBegin(patRc, NULL);
- _setBegin(qual, NULL);
- _setBegin(patFwRev, NULL);
- _setBegin(patRcRev, NULL);
- _setBegin(qualRev, NULL);
- _setBegin(name, NULL);
+ _setBegin(patFw, (Dna5*)NULL);
+ _setBegin(patRc, (Dna5*)NULL);
+ _setBegin(qual, (char*)NULL);
+ _setBegin(patFwRev, (Dna5*)NULL);
+ _setBegin(patRcRev, (Dna5*)NULL);
+ _setBegin(qualRev, (char*)NULL);
+ _setBegin(name, (char*)NULL);
for(int j = 0; j < 3; j++) {
- _setBegin(altPatFw[j], NULL);
- _setBegin(altPatFwRev[j], NULL);
- _setBegin(altPatRc[j], NULL);
- _setBegin(altPatRcRev[j], NULL);
- _setBegin(altQual[j], NULL);
- _setBegin(altQualRev[j], NULL);
+ _setBegin(altPatFw[j], (Dna5*)NULL);
+ _setBegin(altPatFwRev[j], (Dna5*)NULL);
+ _setBegin(altPatRc[j], (Dna5*)NULL);
+ _setBegin(altPatRcRev[j], (Dna5*)NULL);
+ _setBegin(altQual[j], (char*)NULL);
+ _setBegin(altQualRev[j], (char*)NULL);
}
}
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