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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2011-11-28 02:15:41 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2011-11-28 02:15:41 +0000 |
| commit | c1f622f2356d9e4a79331447ff5e64f7f861c848 (patch) | |
| tree | 02dcb4bbb02cb80a4969241315d65be6a5f2c4c5 /sci-biology/bfast | |
| parent | Add local scope for myeconfargs. (diff) | |
| download | historical-c1f622f2356d9e4a79331447ff5e64f7f861c848.tar.gz historical-c1f622f2356d9e4a79331447ff5e64f7f861c848.tar.bz2 historical-c1f622f2356d9e4a79331447ff5e64f7f861c848.zip | |
Version bump
Package-Manager: portage-2.2.0_alpha74/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/bfast')
| -rw-r--r-- | sci-biology/bfast/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/bfast/Manifest | 14 | ||||
| -rw-r--r-- | sci-biology/bfast/bfast-0.7.0a.ebuild | 31 |
3 files changed, 45 insertions, 7 deletions
diff --git a/sci-biology/bfast/ChangeLog b/sci-biology/bfast/ChangeLog index 0032348fde5d..51b096e0ddd9 100644 --- a/sci-biology/bfast/ChangeLog +++ b/sci-biology/bfast/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/bfast # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.6 2011/10/06 12:59:24 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.7 2011/11/28 02:15:41 weaver Exp $ + +*bfast-0.7.0a (28 Nov 2011) + + 28 Nov 2011; Andrey Kislyuk <weaver@gentoo.org> +bfast-0.7.0a.ebuild: + Version bump *bfast-0.6.5a-r1 (06 Oct 2011) diff --git a/sci-biology/bfast/Manifest b/sci-biology/bfast/Manifest index 41d85b261e42..66bbd349c8dc 100644 --- a/sci-biology/bfast/Manifest +++ b/sci-biology/bfast/Manifest @@ -1,15 +1,17 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA512 +Hash: SHA1 DIST bfast-0.6.5a.tar.gz 2456833 RMD160 05d06932e6dab6d627dceb0a8a72ad8055af14b9 SHA1 021b7ee8c12e88574ae6e943690a06237169c16e SHA256 5dbcb6216f45097a21abaa5c8bbbc6f5206f3b6263f43b2f1bb719604e76629b +DIST bfast-0.7.0a.tar.gz 2456617 RMD160 95daa3e29c7c7d8156bd743a28f3bccfd9dc94f6 SHA1 ee43e3df024945b676efdc3c9f82e82eff98c1f7 SHA256 ed8de49693165a87d5dbef352207c424b1bf6f670a83acf49a4f4f188444995e EBUILD bfast-0.6.5a-r1.ebuild 801 RMD160 d6f7846f51bb67cc625f3ef11d747a2dd23a7fc4 SHA1 8fe805bf60d0d5081f32bcf4869954610192ca83 SHA256 9366300b090aa33db65e40ae04391a6223725c455f64828eb1522f0db293a716 EBUILD bfast-0.6.5a.ebuild 788 RMD160 86525854802645725414c642b37ebe857f4f1233 SHA1 7a7e3aab31fa079a1384c04d3528a243bee4e80d SHA256 88011bcea99f58c35d39785b551f76bff8d47d26fdb3c5758610bb1911a5ab0b -MISC ChangeLog 1203 RMD160 f7df9518eb9dbca2afaf28dee3d84fdefd2b577e SHA1 e07e82bcea4e0ade2199d7b5ac67381d655366da SHA256 baac4c9d28cc00141883c773e5f930bb3c9e5f388e5c306eee4400bd59ae5f06 +EBUILD bfast-0.7.0a.ebuild 800 RMD160 fbfaa79a6d0b13f0d6c7d7666ddb40bc20357ad7 SHA1 0b33a41e0ffb374051d9b676953700605ff43776 SHA256 904f987826590a7c5c83e359018336989df1e43107d6604328456a8bbdec09cf +MISC ChangeLog 1322 RMD160 3771ab6b3706c895807d80e1b422d7c6fb3f736c SHA1 5c83c43f05ed1164422b8028465d1b2e117f8076 SHA256 af028296da80e9c794e4a9f185d948701bb1ea28d67e32c4e153198af4bfdaee MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.18 (GNU/Linux) +Version: GnuPG v1.4.11 (GNU/Linux) -iEYEAREKAAYFAk6NpjEACgkQgAnW8HDreRa99gCeKnxqFrpL1lZOFpHh2m4E5dLI -EmMAn3VsmRXG5mnt+tqznXr3M4sTQ/LP -=4jsR +iEYEARECAAYFAk7S7tMACgkQ8xSwyhbn2OacLACeMeDxh9pSISF1880xiSybJ3pr +MuIAmwbRegrvpF2bzery3xtwucVUxHpI +=fEy6 -----END PGP SIGNATURE----- diff --git a/sci-biology/bfast/bfast-0.7.0a.ebuild b/sci-biology/bfast/bfast-0.7.0a.ebuild new file mode 100644 index 000000000000..861e8a93a0f4 --- /dev/null +++ b/sci-biology/bfast/bfast-0.7.0a.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/bfast-0.7.0a.ebuild,v 1.1 2011/11/28 02:15:41 weaver Exp $ + +EAPI=4 + +inherit autotools + +DESCRIPTION="Blat-like Fast Accurate Search Tool" +HOMEPAGE="https://sourceforge.net/projects/bfast/" +SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="dev-perl/XML-Simple" + +src_prepare() { + sed \ + -e 's/-m64//' \ + -e 's/CFLAGS="${default_CFLAGS} ${extended_CFLAGS}"/CFLAGS="${CFLAGS} ${default_CFLAGS} ${extended_CFLAGS}"/' \ + -e 's:-g -O2::g' \ + -i configure.ac || die + sed \ + -e 's:. test.definitions.sh:. ./test.definitions.sh:g' \ + -i tests/*sh || die + eautoreconf +} |