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| author |   Olivier Fisette <ribosome@gentoo.org> | 2006-02-06 22:00:49 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2006-02-06 22:00:49 +0000 |
| commit | 77145ca2286a6842d97ee31ee658285330e41a82 (patch) | |
| tree | 7aa33233be01a00a29405f10e992b751d5534511 /sci-biology/rebase | |
| parent | Added =www-misc/zoneminder-1.22.0 (diff) | |
| download | historical-77145ca2286a6842d97ee31ee658285330e41a82.tar.gz historical-77145ca2286a6842d97ee31ee658285330e41a82.tar.bz2 historical-77145ca2286a6842d97ee31ee658285330e41a82.zip | |
New version.
Package-Manager: portage-2.0.54
Diffstat (limited to 'sci-biology/rebase')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/rebase/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/rebase/files/digest-rebase-602 | 1 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-602.ebuild | 43 |
4 files changed, 53 insertions, 2 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 91ecb7231073..f0c98c0d61db 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/rebase # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.53 2006/01/21 17:22:09 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.54 2006/02/06 22:00:49 ribosome Exp $ + +*rebase-602 (06 Feb 2006) + + 06 Feb 2006; Olivier Fisette <ribosome@gentoo.org> +rebase-602.ebuild: + New version. 21 Jan 2006; Olivier Fisette <ribosome@gentoo.org> -rebase-509.ebuild, -rebase-511.ebuild, -rebase-601.ebuild: diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index 789cad460a84..0f7be0c5f148 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,6 +1,8 @@ -MD5 1069df2e99caf4409ab6a971b61b3656 ChangeLog 7667 +MD5 461a1e2789dce378436b636e858d92b2 ChangeLog 7783 MD5 0327e485fe0040317dd1016583b0d76d files/digest-rebase-512 63 MD5 9b37c587b84cf914d6f9a9b616c493db files/digest-rebase-601-r1 63 +MD5 d652b16d7ec999abd36a1e222a7b0ca9 files/digest-rebase-602 63 MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900 MD5 292928f0068bac8ab37a29c223af581e rebase-512.ebuild 1238 MD5 1f37d617fb4f49bd6f9cc7e8d1942573 rebase-601-r1.ebuild 1363 +MD5 9383effacdb187a2360dbb1112eb3ba7 rebase-602.ebuild 1360 diff --git a/sci-biology/rebase/files/digest-rebase-602 b/sci-biology/rebase/files/digest-rebase-602 new file mode 100644 index 000000000000..0844c6685c10 --- /dev/null +++ b/sci-biology/rebase/files/digest-rebase-602 @@ -0,0 +1 @@ +MD5 6338817cb88c242780e11dd0938ff794 rebase-602.tar.bz2 182098 diff --git a/sci-biology/rebase/rebase-602.ebuild b/sci-biology/rebase/rebase-602.ebuild new file mode 100644 index 000000000000..051c1dbefd3f --- /dev/null +++ b/sci-biology/rebase/rebase-602.ebuild @@ -0,0 +1,43 @@ +# Copyright 1999-2006 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-602.ebuild,v 1.1 2006/02/06 22:00:49 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +LICENSE="public-domain" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" + +SLOT="0" +# Minimal build keeps only the indexed files (if applicable) and the +# documentation. The non-indexed database is not installed. +IUSE="emboss minimal" +KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64" + +DEPEND="emboss? ( >=sci-biology/emboss-3.0.0-r1 )" + +src_compile() { + if use emboss; then + echo + einfo "Indexing ${PN} for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} || die \ + "Failed to install raw database." + fi + newdoc REBASE.DOC README || die "Failed to install documentation." + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/{embossre.enz,embossre.ref,embossre.sup} || die \ + "Failed to install EMBOSS data files." + insinto /usr/share/EMBOSS/data + doins embossre.equ || die "Failed to install enzyme prototypes file." + fi +} |