diff options
author | Jeffrey Gardner <je_fro@gentoo.org> | 2007-07-04 23:56:14 +0000 |
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committer | Jeffrey Gardner <je_fro@gentoo.org> | 2007-07-04 23:56:14 +0000 |
commit | a8838e0f1c2ef604af62e630723857fa20596ff5 (patch) | |
tree | a99b39e430203c7df68e3c85751a99d539f0203b /sci-chemistry/pymol | |
parent | removed src_install() and src_compile(); relocated IUSE; added a pair of quotes (diff) | |
download | historical-a8838e0f1c2ef604af62e630723857fa20596ff5.tar.gz historical-a8838e0f1c2ef604af62e630723857fa20596ff5.tar.bz2 historical-a8838e0f1c2ef604af62e630723857fa20596ff5.zip |
Removing obsolete ebuild/files.
Package-Manager: portage-2.1.2.9
Diffstat (limited to 'sci-chemistry/pymol')
-rw-r--r-- | sci-chemistry/pymol/ChangeLog | 6 | ||||
-rw-r--r-- | sci-chemistry/pymol/Manifest | 30 | ||||
-rw-r--r-- | sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r2 | 3 | ||||
-rw-r--r-- | sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch | 57 | ||||
-rw-r--r-- | sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild | 86 |
5 files changed, 9 insertions, 173 deletions
diff --git a/sci-chemistry/pymol/ChangeLog b/sci-chemistry/pymol/ChangeLog index 909fd9b5ef14..38e802549967 100644 --- a/sci-chemistry/pymol/ChangeLog +++ b/sci-chemistry/pymol/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-chemistry/pymol # Copyright 2002-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.32 2007/07/04 18:00:01 angelos Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.33 2007/07/04 23:56:14 je_fro Exp $ + + 04 Jul 2007; Jeff Gardner <je_fro@gentoo.org> + -files/pymol-0.99_rc6-data-path.patch, -pymol-0.99_rc6-r2.ebuild: + Removing unneeded files. 04 Jul 2007; Christoph Mende <angelos@gentoo.org> pymol-0.99_rc10.ebuild: Stable on amd64 wrt bug #183879 diff --git a/sci-chemistry/pymol/Manifest b/sci-chemistry/pymol/Manifest index 2d41c8ed61e3..92d47d641ce5 100644 --- a/sci-chemistry/pymol/Manifest +++ b/sci-chemistry/pymol/Manifest @@ -1,6 +1,3 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - AUX nosplash-gentoo.patch 332 RMD160 2280fbe9daba8a0d3ca81a3aacfcc55bd06fc7d3 SHA1 275a325f7a9bb076bea72897fd6dd5ed1b014390 SHA256 5e0761591eeea90bcaa06a72c210a80ba46f2542ff985f8dd893af112254a890 MD5 929741dc2da6577e6e99c5542d68dbd5 files/nosplash-gentoo.patch 332 RMD160 2280fbe9daba8a0d3ca81a3aacfcc55bd06fc7d3 files/nosplash-gentoo.patch 332 @@ -9,31 +6,22 @@ AUX pymol-0.99_rc10-data-path.patch 2969 RMD160 608e0e936fccf0860f6b5269e6739c83 MD5 ef6d1169828c5bfdab08ddd59bb6dcf6 files/pymol-0.99_rc10-data-path.patch 2969 RMD160 608e0e936fccf0860f6b5269e6739c839fcd32ea files/pymol-0.99_rc10-data-path.patch 2969 SHA256 10c97c3d4d2f620a2884a812a6997f2cf8472f2e0c589c2630a4d0bcf67656de files/pymol-0.99_rc10-data-path.patch 2969 -AUX pymol-0.99_rc6-data-path.patch 2473 RMD160 76847259270179d6b4196d816da777efb9f83698 SHA1 ec41297decfa365363d86f073c3dd04778bece1e SHA256 93714e86fc9ce8137b5ff06b4f1e5897740de1ed80d577f6874d95ea65cc142d -MD5 035c32a87c619d2c2cf6c0d7466d92e0 files/pymol-0.99_rc6-data-path.patch 2473 -RMD160 76847259270179d6b4196d816da777efb9f83698 files/pymol-0.99_rc6-data-path.patch 2473 -SHA256 93714e86fc9ce8137b5ff06b4f1e5897740de1ed80d577f6874d95ea65cc142d files/pymol-0.99_rc6-data-path.patch 2473 AUX pymol-1.0-r1-data-path.patch 3521 RMD160 bbd8722a1f52944f122caa64642db5dc2609a208 SHA1 735871b06d8f874334ef51fe9054ae92a7fbe523 SHA256 ba0c036b1f01338b42f9e31a0252be59292726289e330f4c33cf52ee48ea9172 MD5 a4374b31425bacedced00a40affff235 files/pymol-1.0-r1-data-path.patch 3521 RMD160 bbd8722a1f52944f122caa64642db5dc2609a208 files/pymol-1.0-r1-data-path.patch 3521 SHA256 ba0c036b1f01338b42f9e31a0252be59292726289e330f4c33cf52ee48ea9172 files/pymol-1.0-r1-data-path.patch 3521 -DIST pymol-0_99rc6-src.tgz 4198816 RMD160 e9dc568dd38fffd37f306adf7e7a109d81dd4477 SHA1 dec1dabdf8cd57b1328b24b985b52c88b484ee4b SHA256 d56bebc1316fd3442c54dee5bc4b2979041943bf50a9b34b44839595fd1b9a59 EBUILD pymol-0.99_rc10.ebuild 2132 RMD160 1285ffb7f4e8dbaed74aea489238724bc88bef81 SHA1 1654b8f518d3f85385f41b14c385a1a39a361bd9 SHA256 7654370378dacb5b957f318a0f9df43827ab8cb0f9f3dc37268cd9e46ec25633 MD5 b6411fb5ffb9d44097d69ab48022d913 pymol-0.99_rc10.ebuild 2132 RMD160 1285ffb7f4e8dbaed74aea489238724bc88bef81 pymol-0.99_rc10.ebuild 2132 SHA256 7654370378dacb5b957f318a0f9df43827ab8cb0f9f3dc37268cd9e46ec25633 pymol-0.99_rc10.ebuild 2132 -EBUILD pymol-0.99_rc6-r2.ebuild 2249 RMD160 e9880c17c713ea7a662d66f413826867e0488a9d SHA1 1f8b294c2207233f3f8cbb02e64589e16e77fd97 SHA256 f1e5aad775ff6eda2898fdf0fce73f0ce42a7bb4259696a2a3468f4b94e49a15 -MD5 d6952c3d9892e84d4a115697e97cac7f pymol-0.99_rc6-r2.ebuild 2249 -RMD160 e9880c17c713ea7a662d66f413826867e0488a9d pymol-0.99_rc6-r2.ebuild 2249 -SHA256 f1e5aad775ff6eda2898fdf0fce73f0ce42a7bb4259696a2a3468f4b94e49a15 pymol-0.99_rc6-r2.ebuild 2249 EBUILD pymol-1.0-r1.ebuild 2117 RMD160 2dcfeb2e4c2f2b3c305659407139f9b2027922c9 SHA1 a8aab337f1245eb2174400f3f03cdd3df20a6225 SHA256 6955b2f830acd8047b78fea795466bdcff95264869a717ee3353284946ffb441 MD5 c1b7327301e444a95d336e727ddce5ea pymol-1.0-r1.ebuild 2117 RMD160 2dcfeb2e4c2f2b3c305659407139f9b2027922c9 pymol-1.0-r1.ebuild 2117 SHA256 6955b2f830acd8047b78fea795466bdcff95264869a717ee3353284946ffb441 pymol-1.0-r1.ebuild 2117 -MISC ChangeLog 7800 RMD160 8b3fd8e25185891f44cb7db6e4030eef23910cd6 SHA1 ac99c79c7a31a7fdb8f2eae00d88f836d8424c16 SHA256 66881b2bd091ae73433a02b99c755caf2406bcff66446fdde3f82a3cf02324bc -MD5 41235ac19cfd982d1ddbd58007637ff7 ChangeLog 7800 -RMD160 8b3fd8e25185891f44cb7db6e4030eef23910cd6 ChangeLog 7800 -SHA256 66881b2bd091ae73433a02b99c755caf2406bcff66446fdde3f82a3cf02324bc ChangeLog 7800 +MISC ChangeLog 7943 RMD160 2d0c8674ee10e742577b0ede12b51a7d7d95500f SHA1 c374211d5e38725bc93c8e3656ce8ba12e686d2f SHA256 cd0e2df419a2d434b475204f81fffbd647900f6087e2aa8a77e7f0f3e59b7f07 +MD5 afdc6ddefd26a3791a8d9aa9bc8c78f4 ChangeLog 7943 +RMD160 2d0c8674ee10e742577b0ede12b51a7d7d95500f ChangeLog 7943 +SHA256 cd0e2df419a2d434b475204f81fffbd647900f6087e2aa8a77e7f0f3e59b7f07 ChangeLog 7943 MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852 MD5 43628e9f5743b5c3b018a82669a76bc7 metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 metadata.xml 166 @@ -41,16 +29,6 @@ SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852 metadata MD5 d41d8cd98f00b204e9800998ecf8427e files/digest-pymol-0.99_rc10 0 RMD160 9c1185a5c5e9fc54612808977ee8f548b2258d31 files/digest-pymol-0.99_rc10 0 SHA256 e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855 files/digest-pymol-0.99_rc10 0 -MD5 925dc45d0ae6070f5506dffc1d100975 files/digest-pymol-0.99_rc6-r2 247 -RMD160 505a34a7bebbbdd2c60913ea3ec7cd41164eeaff files/digest-pymol-0.99_rc6-r2 247 -SHA256 4644dbddb3d8af1a2956282b351c228ded4ebb2fe628a571e0e929922a1b485a files/digest-pymol-0.99_rc6-r2 247 MD5 d41d8cd98f00b204e9800998ecf8427e files/digest-pymol-1.0-r1 0 RMD160 9c1185a5c5e9fc54612808977ee8f548b2258d31 files/digest-pymol-1.0-r1 0 SHA256 e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855 files/digest-pymol-1.0-r1 0 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.4 (GNU/Linux) - -iD8DBQFGi+AkKhnDs22gwa8RApHfAJ0QeUgC1t5EawHuJGts4Qx0mK9IiACgy472 -Qugd0Wj6iS08NjSy0AiI0n8= -=cMtk ------END PGP SIGNATURE----- diff --git a/sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r2 b/sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r2 deleted file mode 100644 index 3a462090ec4e..000000000000 --- a/sci-chemistry/pymol/files/digest-pymol-0.99_rc6-r2 +++ /dev/null @@ -1,3 +0,0 @@ -MD5 cb29385ab523f648d4db47a222b1d03e pymol-0_99rc6-src.tgz 4198816 -RMD160 e9dc568dd38fffd37f306adf7e7a109d81dd4477 pymol-0_99rc6-src.tgz 4198816 -SHA256 d56bebc1316fd3442c54dee5bc4b2979041943bf50a9b34b44839595fd1b9a59 pymol-0_99rc6-src.tgz 4198816 diff --git a/sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch b/sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch deleted file mode 100644 index 2ecad7f21b5f..000000000000 --- a/sci-chemistry/pymol/files/pymol-0.99_rc6-data-path.patch +++ /dev/null @@ -1,57 +0,0 @@ ---- commanding.py.old 2006-03-15 21:10:36.000000000 -0500 -+++ commanding.py 2006-03-15 21:12:27.000000000 -0500 -@@ -121,7 +121,7 @@ - r = DEFAULT_ERROR - mode = int(mode) - if mode == 1: # just show PNG -- png_path = cmd.exp_path("$PYMOL_PATH/data/pymol/splash.png") -+ png_path = cmd.exp_path("$PYMOL_DATA/pymol/splash.png") - if os.path.exists(png_path): - cmd.do("_ cmd.load_png('%s',0,quiet=1)"%png_path) - r = DEFAULT_SUCCESS ---- fitting.py.old 2006-03-15 21:14:01.000000000 -0500 -+++ fitting.py 2006-03-15 21:13:24.000000000 -0500 -@@ -61,7 +61,7 @@ - r = DEFAULT_ERROR - source = selector.process(source) - target = selector.process(target) -- mfile = cmd.exp_path("$PYMOL_PATH/data/pymol/matrices/"+matrix) -+ mfile = cmd.exp_path("$PYMOL_DATA/pymol/matrices/"+matrix) - if object==None: object='' - try: - lock() ---- importing.py.old 2006-03-15 21:15:34.000000000 -0500 -+++ importing.py 2006-03-15 21:15:04.000000000 -0500 -@@ -176,7 +176,7 @@ - r = DEFAULT_ERROR - - -- tables = { 'cmyk' : "$PYMOL_PATH/data/pymol/cmyk.png", -+ tables = { 'cmyk' : "$PYMOL_DATA/pymol/cmyk.png", - 'pymol' : 'pymol', - 'rgb' : 'rgb' } - ---- wizard/mutagenesis.py.old 2006-03-15 21:44:06.000000000 -0500 -+++ wizard/mutagenesis.py 2006-03-15 21:57:48.000000000 -0500 -@@ -35,8 +35,8 @@ - - self.dep = default_dep - -- self.ind_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ -- "/data/chempy/sidechains/sc_bb_ind.pkl") -+ self.ind_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ -+ "/chempy/sidechains/sc_bb_ind.pkl") - self.load_library() - self.status = 0 # 0 no selection, 1 mutagenizing - self.bump_check = 1 -@@ -107,8 +107,8 @@ - def load_library(self): - if self.dep == 'dep': - if not hasattr(self,'dep_library'): -- self.dep_library = io.pkl.fromFile(os.environ['PYMOL_PATH']+ -- "/data/chempy/sidechains/sc_bb_dep.pkl") -+ self.dep_library = io.pkl.fromFile(os.environ['PYMOL_DATA']+ -+ "/chempy/sidechains/sc_bb_dep.pkl") - - def set_mode(self,mode): - if mode in self.modes: diff --git a/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild b/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild deleted file mode 100644 index ea47b4796788..000000000000 --- a/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild +++ /dev/null @@ -1,86 +0,0 @@ -# Copyright 1999-2007 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-0.99_rc6-r2.ebuild,v 1.6 2007/06/01 17:34:49 nixnut Exp $ - -inherit distutils eutils multilib - -MY_PV=${PV/_} -MY_S_P="${PN}-${MY_PV}" -MY_PV=${MY_PV/./_} -MY_P="${PN}-${MY_PV}" - -DESCRIPTION="A Python-extensible molecular graphics system." -HOMEPAGE="http://pymol.sourceforge.net/" -SRC_URI="mirror://sourceforge/pymol/${MY_P}-src.tgz" - -LICENSE="PSF-2.2" -IUSE="" -SLOT="0" -KEYWORDS="amd64 ppc x86" - -DEPEND="dev-lang/python - dev-python/pmw - dev-python/numeric - dev-lang/tk - media-libs/libpng - sys-libs/zlib - media-libs/glut" - -S="${WORKDIR}/${MY_S_P}" - -pkg_setup() { - distutils_python_tkinter -} - -src_unpack() { - unpack ${A} - cd "${S}"/modules/${PN} - epatch "${FILESDIR}"/${P}-data-path.patch - cd "${S}" - # Turn off splash screen. Please do make a project contribution - # if you are able though. - [[ -n "$WANT_NOSPLASH" ]] && epatch "${FILESDIR}"/nosplash-gentoo.patch - - # Respect CFLAGS - sed -i \ - -e "s:\(ext_comp_args=\).*:\1[]:g" \ - "${S}"/setup.py -} - -src_install() { - python_version - - distutils_src_install - cd "${S}" - - #The following three lines probably do not do their jobs and should be - #changed - PYTHONPATH="${D}/usr/$(get_libdir)/site-packages" ${python} setup2.py - - # These environment variables should not go in the wrapper script, or else - # it will be impossible to use the PyMOL libraries from Python. -cat >> "${T}"/20pymol << EOF -PYMOL_PATH=/usr/lib/python${PYVER}/site-packages/pymol -PYMOL_DATA="/usr/share/pymol/data" -PYMOL_SCRIPTS="/usr/share/pymol/scripts" -EOF - - doenvd "${T}"/20pymol || die "Failed to install env.d file." - - # Make our own wrapper -cat >> "${T}"/pymol << EOF -#!/bin/sh -${python} \${PYMOL_PATH}/__init__.py \$* -EOF - - exeinto /usr/bin - doexe "${T}"/pymol || die "Failed to install wrapper." - dodoc DEVELOPERS CHANGES || die "Failed to install docs." - - mv examples "${D}"/usr/share/doc/${PF}/ || die "Failed moving docs." - - dodir /usr/share/pymol - mv test "${D}"/usr/share/pymol/ || die "Failed moving test files." - mv data "${D}"/usr/share/pymol/ || die "Failed moving data files." - mv scripts "${D}"/usr/share/pymol/ || die "Failed moving scripts." -} |