blob: 9ae4ce3e5adb1e6cf3524b102f950f4fb33580f9 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
|
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/dev-lang/R/R-2.10.1.ebuild,v 1.12 2011/06/23 13:03:38 jlec Exp $
EAPI=2
inherit bash-completion eutils flag-o-matic fortran-2 versionator
DESCRIPTION="Language and environment for statistical computing and graphics"
HOMEPAGE="http://www.r-project.org/"
SRC_URI="
mirror://cran/src/base/R-2/${P}.tar.gz
bash-completion? ( mirror://gentoo/R.bash_completion.bz2 )"
LICENSE="GPL-2 LGPL-2.1"
SLOT="0"
KEYWORDS="alpha amd64 hppa ia64 ppc ppc64 sparc x86 ~x86-fbsd"
IUSE="cairo doc java jpeg lapack minimal nls perl png readline threads tk X"
# common depends
CDEPEND="
app-arch/bzip2
app-text/ghostscript-gpl
dev-libs/libpcre
virtual/blas
virtual/fortran
cairo? (
x11-libs/cairo[X]
|| ( >=x11-libs/pango-1.20[X] <x11-libs/pango-1.20 ) )
jpeg? ( virtual/jpeg )
lapack? ( virtual/lapack )
perl? ( dev-lang/perl )
png? ( media-libs/libpng )
readline? ( sys-libs/readline )
tk? ( dev-lang/tk )
X? ( x11-libs/libXmu x11-misc/xdg-utils )"
DEPEND="${CDEPEND}
dev-util/pkgconfig
doc? (
virtual/latex-base
|| (
dev-texlive/texlive-fontsrecommended
app-text/ptex ) )"
RDEPEND="${CDEPEND}
app-arch/unzip
app-arch/zip
java? ( >=virtual/jre-1.5 )"
RESTRICT="minimal? ( test )"
R_DIR=/usr/$(get_libdir)/${PN}
pkg_setup() {
fortran-2_pkg_setup
filter-ldflags -Wl,-Bdirect -Bdirect
# avoid using existing R installation
unset R_HOME
}
src_prepare() {
# fix packages.html for doc (bug #205103)
# check in later versions if fixed
sed -i \
-e "s:../../library:../../../../$(get_libdir)/R/library:g" \
src/library/tools/R/packageshtml.R \
|| die "sed failed"
# fix Rscript
sed -i \
-e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${R_DIR}\"':" \
src/unix/Makefile.in || die "sed unix Makefile failed"
# fix HTML links to manual (bug #273957)
sed -i -e 's:\.\./manual/:manual/:g' $(grep -Flr ../manual/ doc) \
|| die "sed for HTML links to manual failed"
use lapack && \
export LAPACK_LIBS="$(pkg-config --libs lapack)"
if use X; then
export R_BROWSER="$(type -p xdg-open)"
export R_PDFVIEWER="$(type -p xdg-open)"
fi
use perl && \
export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}"
}
src_configure() {
econf \
--disable-rpath \
--enable-R-profiling \
--enable-memory-profiling \
--enable-R-shlib \
--enable-linux-lfs \
--with-system-zlib \
--with-system-bzlib \
--with-system-pcre \
--with-blas="$(pkg-config --libs blas)" \
--docdir=/usr/share/doc/${PF} \
rdocdir=/usr/share/doc/${PF} \
$(use_enable nls) \
$(use_enable threads) \
$(use_with lapack) \
$(use_with tk tcltk) \
$(use_with jpeg jpeglib) \
$(use_with !minimal recommended-packages) \
$(use_with png libpng) \
$(use_with readline) \
$(use_with cairo) \
$(use_with X x)
}
src_compile(){
emake || die "emake failed"
RMATH_V=0.0.0
emake -j1 -C src/nmath/standalone \
libRmath_la_LDFLAGS=-Wl,-soname,libRmath.so.${RMATH_V} \
|| die "emake math library failed"
if use doc; then
export VARTEXFONTS="${T}/fonts"
emake info pdf || die "emake docs failed"
fi
}
src_install() {
emake DESTDIR="${D}" install || die "emake install failed"
if use doc; then
emake DESTDIR="${D}" \
install-info install-pdf || die "emake install docs failed"
dosym /usr/share/doc/${PF}/manual /usr/share/doc/${PF}/html/manual
fi
# standalone math lib install (-j1 basically harmless)
emake -j1 \
-C src/nmath/standalone \
DESTDIR="${D}" install \
|| die "emake install math library failed"
local mv=$(get_major_version ${RMATH_V})
mv "${D}"/usr/$(get_libdir)/libRmath.so \
"${D}"/usr/$(get_libdir)/libRmath.so.${RMATH_V}
dosym libRmath.so.${RMATH_V} /usr/$(get_libdir)/libRmath.so.${mv}
dosym libRmath.so.${mv} /usr/$(get_libdir)/libRmath.so
# env file
cat > 99R <<-EOF
LDPATH=${R_DIR}/lib
R_HOME=${R_DIR}
EOF
doenvd 99R || die "doenvd failed"
dobashcompletion "${WORKDIR}"/R.bash_completion
}
pkg_config() {
if use java; then
einfo "Re-initializing java paths for ${P}"
R CMD javareconf
fi
}
|
GitWeb