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authorDavid Seifert <soap@gentoo.org>2017-02-06 21:48:02 +0100
committerDavid Seifert <soap@gentoo.org>2017-02-06 22:26:41 +0100
commit51d123886275dc5e4a3b91fbac47600d4da7f196 (patch)
tree0cbb0202a93fa12eec00e5e84b9227ff5cfea45c /sci-biology/maq
parentsci-biology/maq: Modernise to EAPI 6 (diff)
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sci-biology/maq: Remove old
Package-Manager: Portage-2.3.3, Repoman-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3856
Diffstat (limited to 'sci-biology/maq')
-rw-r--r--sci-biology/maq/maq-0.7.1-r1.ebuild40
-rw-r--r--sci-biology/maq/maq-0.7.1.ebuild24
2 files changed, 0 insertions, 64 deletions
diff --git a/sci-biology/maq/maq-0.7.1-r1.ebuild b/sci-biology/maq/maq-0.7.1-r1.ebuild
deleted file mode 100644
index 1fd699b79e05..000000000000
--- a/sci-biology/maq/maq-0.7.1-r1.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-inherit autotools eutils
-
-DESCRIPTION="Mapping and Assembly with Qualities, mapping NGS reads to reference genomes"
-HOMEPAGE="http://maq.sourceforge.net/"
-SRC_URI="
- mirror://sourceforge/${PN}/${P}.tar.bz2
- mirror://sourceforge/${PN}/calib-36.dat.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-
-RDEPEND="sys-libs/zlib"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
- epatch \
- "${FILESDIR}"/${P}-flags.patch \
- "${FILESDIR}"/${P}-bfr-overfl.patch \
- "${FILESDIR}"/${P}-gcc-4.7.patch
- sed \
- -e '/ext_CFLAGS/s:-m64::g' \
- -i configure* || die
- eautoreconf
-}
-
-src_install() {
- default
- insinto /usr/share/maq
- doins "${WORKDIR}"/*.dat
- doman maq.1
- dodoc ${PN}.pdf
-}
diff --git a/sci-biology/maq/maq-0.7.1.ebuild b/sci-biology/maq/maq-0.7.1.ebuild
deleted file mode 100644
index 1f8df1f795ac..000000000000
--- a/sci-biology/maq/maq-0.7.1.ebuild
+++ /dev/null
@@ -1,24 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-DESCRIPTION="Mapping and Assembly with Qualities, mapping NGS reads to reference genomes"
-HOMEPAGE="http://maq.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/${P}.tar.bz2
- mirror://sourceforge/${PN}/calib-36.dat.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86"
-
-DEPEND=""
-RDEPEND=""
-
-src_install() {
- emake DESTDIR="${D}" install || die
- insinto /usr/share/maq
- doins "${WORKDIR}"/*.dat || die
- doman maq.1
- dodoc AUTHORS ChangeLog NEWS maq.pdf
-}