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authorArthur Zamarin <arthurzam@gentoo.org>2024-07-19 14:29:45 +0300
committerArthur Zamarin <arthurzam@gentoo.org>2024-07-19 14:34:41 +0300
commit9cb5f1a94d10366fc15e0668de4c5cc0cd261b78 (patch)
treee37398b36896401b10b2cdda814a48b77688d766 /sci-chemistry
parentsci-chemistry/namd: treeclean (diff)
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sci-chemistry/xyza2pipe: treeclean
Bug: https://bugs.gentoo.org/934232 Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/xyza2pipe/Manifest1
-rw-r--r--sci-chemistry/xyza2pipe/files/xyza2pipe-20121001-gentoo.patch168
-rw-r--r--sci-chemistry/xyza2pipe/metadata.xml8
-rw-r--r--sci-chemistry/xyza2pipe/xyza2pipe-20121001.ebuild34
4 files changed, 0 insertions, 211 deletions
diff --git a/sci-chemistry/xyza2pipe/Manifest b/sci-chemistry/xyza2pipe/Manifest
deleted file mode 100644
index 673bfd1224c1..000000000000
--- a/sci-chemistry/xyza2pipe/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST xyza2pipe-20121001.tgz 61002 BLAKE2B 648e65b63cc0b363dd0087b7ef64a1e287654a165baaf7d967821f11cffb70dd7f0da864dfa3b915553546c8cbbc83fda411d9b979551d3d72334db6580e5d64 SHA512 b64abf46a8d7f3530eecaeec3bc8b143600c6823174a22727868087c2f7f17af0b538a0521e3a29806dc608b003948a1e31296ab395bc3c0089c5dc7a391d855
diff --git a/sci-chemistry/xyza2pipe/files/xyza2pipe-20121001-gentoo.patch b/sci-chemistry/xyza2pipe/files/xyza2pipe-20121001-gentoo.patch
deleted file mode 100644
index ec4220dd0695..000000000000
--- a/sci-chemistry/xyza2pipe/files/xyza2pipe-20121001-gentoo.patch
+++ /dev/null
@@ -1,168 +0,0 @@
- Makefile | 106 +++++++++++++++++++++++++++++++++++++--------------------------
- 1 file changed, 63 insertions(+), 43 deletions(-)
-
-diff --git a/Makefile b/Makefile
-index 15d4bd3..e738ec2 100644
---- a/Makefile
-+++ b/Makefile
-@@ -4,7 +4,7 @@
- # Last modified: Feb/22/2012
- #
-
--CFLAGS = -O3
-+CFLAGS ?= -O3
- MFLAGS = -lm
-
- TARGETS = xyza2pipe ucsf2pipe nv2pipe xeasy2pipe azara2pipe vnmr2pipe xwnmr2pipe\
-@@ -62,89 +62,109 @@ clean:
- rm -f $(TARGETS) addxyza2pipe
-
- $(OBJECTS_MATH):
-- $(CC) $*.c -c -o $@ $(CFLAGS) -D__XYZA2PIPE__
-+ $(CC) $(CPPFLAGS) -D__XYZA2PIPE__ $(CFLAGS) $*.c -c -o $@
-
- .o:
-- $(CC) $< -c -o $@ $(CFLAGS)
-+ $(CC) $(CPPFLAGS) $(CFLAGS) $< -c -o $@
-
- xyza2pipe: $(OBJECTS_C) $(OBJECTS_XP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- pipe2xyza: $(OBJECTS_C) $(OBJECTS_PX)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- ucsf2pipe: $(OBJECTS_C) $(OBJECTS_UP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- pipe2ucsf: $(OBJECTS_C) $(OBJECTS_PU)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- nv2pipe: $(OBJECTS_C) $(OBJECTS_NP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- pipe2nv: $(OBJECTS_C) $(OBJECTS_PN)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- xeasy2pipe: $(OBJECTS_C) $(OBJECTS_EP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- pipe2xeasy: $(OBJECTS_C) $(OBJECTS_PE)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- azara2pipe: $(OBJECTS_C) $(OBJECTS_AP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- pipe2azara: $(OBJECTS_C) $(OBJECTS_PA)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- vnmr2pipe: $(OBJECTS_C) $(OBJECTS_VP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- xwnmr2pipe: $(OBJECTS_C) $(OBJECTS_BP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- pipe2proj: $(OBJECTS_C) $(OBJECTS_PJ)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- add2pipe: $(OBJECTS_C) $(OBJECTS_DXP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
- rm -f addxyza2pipe
- ln -s add2pipe addxyza2pipe
-
- adducsf2pipe: $(OBJECTS_C) $(OBJECTS_DUP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- addnv2pipe: $(OBJECTS_C) $(OBJECTS_DNP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- addxeasy2pipe: $(OBJECTS_C) $(OBJECTS_DEP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- addazara2pipe: $(OBJECTS_C) $(OBJECTS_DAP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- addvnmr2pipe: $(OBJECTS_C) $(OBJECTS_DVP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
-
- addxwnmr2pipe: $(OBJECTS_C) $(OBJECTS_DBP)
-- $(CC) $@.c $^ -o $@ \
-- $(CFLAGS) $(MFLAGS)
-+ $(CC) $(CFLAGS) $(LDFLAGS) $@.c $^ -o $@ \
-+ $(MFLAGS)
-+ mv -v $@ bin/
diff --git a/sci-chemistry/xyza2pipe/metadata.xml b/sci-chemistry/xyza2pipe/metadata.xml
deleted file mode 100644
index e490bcb8aa87..000000000000
--- a/sci-chemistry/xyza2pipe/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-chemistry@gentoo.org</email>
- <name>Gentoo Chemistry Project</name>
- </maintainer>
-</pkgmetadata>
diff --git a/sci-chemistry/xyza2pipe/xyza2pipe-20121001.ebuild b/sci-chemistry/xyza2pipe/xyza2pipe-20121001.ebuild
deleted file mode 100644
index e6ba5c19332f..000000000000
--- a/sci-chemistry/xyza2pipe/xyza2pipe-20121001.ebuild
+++ /dev/null
@@ -1,34 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit toolchain-funcs
-
-DESCRIPTION="Cross conversion environment of NMR spectra"
-HOMEPAGE="http://fermi.pharm.hokudai.ac.jp/olivia/api/index.php/Xyza2pipe_src"
-SRC_URI="http://fermi.pharm.hokudai.ac.jp/olivia/documents/xyza2pipe.tgz -> ${P}.tgz"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-LICENSE="olivia"
-IUSE=""
-
-S="${WORKDIR}"/${PN}
-
-PATCHES=( "${FILESDIR}"/${P}-gentoo.patch )
-
-src_prepare() {
- default
- tc-export CC
- mkdir bin || die
-}
-
-src_install() {
- local i
- dodoc README FEEDBACK
- cd bin || die
- for i in *; do
- newbin ${i}{,-olivia}
- done
-}