diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
210 files changed, 210 insertions, 210 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 index 985f7b3dbd35..2c18901f798f 100644 --- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 +++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 @@ -10,5 +10,5 @@ RESTRICT=mirror SLOT=0 SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=9632d8d4bd171156ad6edf821009dbc6 diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index 418ba6ec3076..27cc8128acf5 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -10,5 +10,5 @@ RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:webapp pkg_setup:webapp src_unpack:perl-module src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be webapp 42c6ef7af496b228f9854b3c81e4b226 +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be webapp 42c6ef7af496b228f9854b3c81e4b226 _md5_=caf58a720664c095c77fe9b64b311dbe diff --git a/metadata/md5-cache/sci-biology/abyss-1.3.3 b/metadata/md5-cache/sci-biology/abyss-1.3.3 index e105a9147bb1..7855aa57496e 100644 --- a/metadata/md5-cache/sci-biology/abyss-1.3.3 +++ b/metadata/md5-cache/sci-biology/abyss-1.3.3 @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/sparsehash dev-libs/boost mpi? ( virtual/mpi ) SLOT=0 SRC_URI=http://www.bcgsc.ca/downloads/abyss/abyss-1.3.3.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=cd8ca0a92b04d5ab1ebf39e92c92d888 diff --git a/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 b/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 index 8dd8e05a3540..bf484d867f19 100644 --- a/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 +++ b/metadata/md5-cache/sci-biology/abyss-1.3.6-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-cpp/sparsehash dev-libs/boost misc-haskell? ( dev-libs/gmp:0= virtua SLOT=0 SRC_URI=http://www.bcgsc.ca/downloads/abyss/abyss-1.3.6.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5edcc89dbe8b21d260f6545673c709d5 diff --git a/metadata/md5-cache/sci-biology/allpathslg-42337 b/metadata/md5-cache/sci-biology/allpathslg-42337 index 07f36f4ee737..da753ad7779c 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-42337 +++ b/metadata/md5-cache/sci-biology/allpathslg-42337 @@ -8,5 +8,5 @@ LICENSE=MIT SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-42337.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5dbc3e63efe609db145c569cdcba1922 diff --git a/metadata/md5-cache/sci-biology/allpathslg-52488-r1 b/metadata/md5-cache/sci-biology/allpathslg-52488-r1 index ef84ac083ca3..805dbe1c8088 100644 --- a/metadata/md5-cache/sci-biology/allpathslg-52488-r1 +++ b/metadata/md5-cache/sci-biology/allpathslg-52488-r1 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/vaal SLOT=0 SRC_URI=ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/allpathslg-52488.tar.gz _eclass_exported_funcs=pkg_pretend:- src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6161883eb3e0d1523a6d0d6889d91ce4 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r2 b/metadata/md5-cache/sci-biology/amap-2.2-r2 index 7cc5272eb67e..2e2219cf551b 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r2 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r2 @@ -10,5 +10,5 @@ RDEPEND=java? ( >=virtual/jre-1.5 ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-opt-2 pkg_setup:java-pkg-opt-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-opt-2 40db73f27fc6458ec2105812a4f261c7 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-opt-2 40db73f27fc6458ec2105812a4f261c7 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8010150e6242df5d294ab35b887af2a1 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0 b/metadata/md5-cache/sci-biology/amos-3.1.0 index 51d54a9f99ad..e689bbe39167 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0 @@ -10,5 +10,5 @@ RDEPEND=qt4? ( dev-qt/qtcore:4 ) dev-perl/DBI dev-perl/Statistics-Descriptive sc SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=57af6bf2b801ff256544c1ae4d6e2239 diff --git a/metadata/md5-cache/sci-biology/amos-3.1.0-r1 b/metadata/md5-cache/sci-biology/amos-3.1.0-r1 index 51bb9105a89a..7ba95cdb8d12 100644 --- a/metadata/md5-cache/sci-biology/amos-3.1.0-r1 +++ b/metadata/md5-cache/sci-biology/amos-3.1.0-r1 @@ -10,5 +10,5 @@ RDEPEND=qt4? ( dev-qt/qtcore:4 ) dev-perl/DBI dev-perl/Statistics-Descriptive sc SLOT=0 SRC_URI=mirror://sourceforge/amos/amos-3.1.0.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=c6ea5f3288847da2901f769d10d3429b diff --git a/metadata/md5-cache/sci-biology/arb-5.1-r1 b/metadata/md5-cache/sci-biology/arb-5.1-r1 index 35638a793926..77986be560d8 100644 --- a/metadata/md5-cache/sci-biology/arb-5.1-r1 +++ b/metadata/md5-cache/sci-biology/arb-5.1-r1 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.1/arbsrc.tgz -> arb-5.1.tgz mirror://gentoo/arb-5.1-glibc2.10.patch.bz2 https://dev.gentoo.org/~jlec/arb-5.1-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=ccac55e99a86ba7bca4258e0de6a277a diff --git a/metadata/md5-cache/sci-biology/arb-5.2 b/metadata/md5-cache/sci-biology/arb-5.2 index 2a1b5da9dc7d..52bb97af3330 100644 --- a/metadata/md5-cache/sci-biology/arb-5.2 +++ b/metadata/md5-cache/sci-biology/arb-5.2 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.2/arbsrc.tgz -> arb-5.2.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.2-linker.patch.bz2 _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=c1e75a5c097ccea22adb427050d7ea9a diff --git a/metadata/md5-cache/sci-biology/arb-5.3 b/metadata/md5-cache/sci-biology/arb-5.3 index eb774292d096..af7398f02f33 100644 --- a/metadata/md5-cache/sci-biology/arb-5.3 +++ b/metadata/md5-cache/sci-biology/arb-5.3 @@ -10,5 +10,5 @@ RDEPEND=app-text/sablotron media-libs/libpng media-libs/tiff www-client/lynx x11 SLOT=0 SRC_URI=http://download.arb-home.de/release/arb_5.3/arbsrc.tgz -> arb-5.3.tgz https://dev.gentoo.org/~jlec/distfiles/arb-5.3-linker.patch.xz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6f4ceede9236fd4baf2032128fab2349 diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r1 b/metadata/md5-cache/sci-biology/ariadne-1.3-r1 index d08ec22bfb5f..46d8ff695c64 100644 --- a/metadata/md5-cache/sci-biology/ariadne-1.3-r1 +++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r1 @@ -9,5 +9,5 @@ RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1 SLOT=0 SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z _eclass_exported_funcs=src_unpack:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=1742c4b03c22637909dd5c35478feffe diff --git a/metadata/md5-cache/sci-biology/ariadne-1.3-r2 b/metadata/md5-cache/sci-biology/ariadne-1.3-r2 index 8bcdd1e48d5b..3f7aedb19394 100644 --- a/metadata/md5-cache/sci-biology/ariadne-1.3-r2 +++ b/metadata/md5-cache/sci-biology/ariadne-1.3-r2 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/ncbi-tools-0.20041020-r1 SLOT=0 SRC_URI=http://www.well.ox.ac.uk/ariadne/ariadne-1.3.tar.Z _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6760dd272f3876553a07c32a95d4f672 diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 08a0117a4fec..be4887e696e6 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -8,5 +8,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=d0f9ba272acefc27ec7b12c6d3b2b01d diff --git a/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 b/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 index 123d36cadc75..2035fe3ce7d4 100644 --- a/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/bamtools-1.0.2-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/jsoncpp sys-libs/zlib SLOT=0 SRC_URI=mirror://github/pezmaster31/bamtools/bamtools-1.0.2.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=7510135c49b6f635124664572ea56bb2 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.3.0 b/metadata/md5-cache/sci-biology/bamtools-2.3.0 index 79e6f59aa38b..a94885486753 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.3.0 +++ b/metadata/md5-cache/sci-biology/bamtools-2.3.0 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/jsoncpp-0.5.0-r1 <dev-libs/jsoncpp-1 sys-libs/zlib SLOT=0 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz -> bamtools-2.3.0.tar.gz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=14b6521e2975f38128d76c7ba4a5fb31 diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 index 74fcf319df9a..c3eaf6b0ce7b 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-1.7.5-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-j SLOT=0 SRC_URI=https://dev.gentoo.org/~jlec/distfiles/beast-mcmc-1.7.5.tar.xz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=78a597e327e0b56f4074f590ef3eca4c diff --git a/metadata/md5-cache/sci-biology/beast-mcmc-9999 b/metadata/md5-cache/sci-biology/beast-mcmc-9999 index 58f2bd0286a8..2624018c8041 100644 --- a/metadata/md5-cache/sci-biology/beast-mcmc-9999 +++ b/metadata/md5-cache/sci-biology/beast-mcmc-9999 @@ -8,5 +8,5 @@ LICENSE=LGPL-3 RDEPEND=>=virtual/jre-1.5 dev-java/colt:0 dev-java/jdom:0 dev-java/itext:0 dev-java/junit:4 dev-java/jebl:0 dev-java/matrix-toolkits-java dev-java/commons-math:2 dev-java/jdom-jaxen:1.0 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:subversion pkg_setup:java-pkg-2 src_unpack:subversion src_prepare:- src_configure:java-ant-2 src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 subversion 4fee0a764150bb4dda27ed4d2c4ed7ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 subversion 4fee0a764150bb4dda27ed4d2c4ed7ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=91fd25b95c1888b46de27b583565e9d0 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.16.2 b/metadata/md5-cache/sci-biology/bedtools-2.16.2 index 9eb3dde185df..c2da9d44e240 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.16.2 +++ b/metadata/md5-cache/sci-biology/bedtools-2.16.2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://bedtools.googlecode.com/files/BEDTools.v2.16.2.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=b94632a5016d667839021935025ec232 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.20.1 b/metadata/md5-cache/sci-biology/bedtools-2.20.1 index 48cd6a690031..e03a2f9646a6 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.20.1 +++ b/metadata/md5-cache/sci-biology/bedtools-2.20.1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.20.1/bedtools-2.20.1.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2d2463a3300cf65fbdc35148dc17f093 diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index 2b79063d58ca..5c9a67bd3be4 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=78320f55e4a3ad5d498ceb56ecbc3171 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r1 b/metadata/md5-cache/sci-biology/biogrep-1.0-r1 index 5a50ef4b4de8..13bdd7b0c790 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r1 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://web.mit.edu/bamel/biogrep-1.0.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=1dfeddc4aec877d95b036ca150a63ec5 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.1.4 b/metadata/md5-cache/sci-biology/biopandas-0.1.4 index 79e715ea7882..41a873fa03f1 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.1.4 +++ b/metadata/md5-cache/sci-biology/biopandas-0.1.4 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_3 python_targe SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.1.4.tar.gz _eclass_exported_funcs=src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=91683944bda72d8b5f7f71f9ee5f3217 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index 9871f3a625df..8fefc26d48da 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -12,5 +12,5 @@ REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=a3fea82483d3bcdeb956b1e4d6842382 diff --git a/metadata/md5-cache/sci-biology/bioperl-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-9999-r1 index 325e95fe0a47..ebd137473c29 100644 --- a/metadata/md5-cache/sci-biology/bioperl-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-9999-r1 @@ -9,5 +9,5 @@ PDEPEND=!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) db? ( >=sci-biology/bioperl-d RDEPEND=dev-perl/Data-Stag dev-perl/libwww-perl !minimal? ( dev-perl/Ace dev-perl/Bio-ASN1-EntrezGene dev-perl/Spreadsheet-ParseExcel dev-perl/Spreadsheet-WriteExcel >=dev-perl/XML-SAX-0.15 dev-perl/Graph dev-perl/SOAP-Lite dev-perl/Array-Compare dev-perl/SVG dev-perl/XML-Simple dev-perl/XML-Parser dev-perl/XML-Twig >=dev-perl/HTML-Parser-3.60 >=dev-perl/XML-Writer-0.4 dev-perl/Clone dev-perl/XML-DOM dev-perl/Set-Scalar dev-perl/XML-XPath dev-perl/XML-DOM-XPath dev-perl/Algorithm-Munkres dev-perl/Data-Stag dev-perl/Math-Random dev-perl/PostScript dev-perl/Convert-Binary-C dev-perl/SVG-Graph ) graphviz? ( dev-perl/GraphViz ) dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=68bced1b8c97790607fc2990bdd34bb4 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index e2a0d8d55d32..8f955a3186bf 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=c86ac1da0676ffecc4a6d1473143a1ea diff --git a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 index 2fceaac8deb0..d7fb9b9c3604 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-db-9999-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 dev-perl/DBI sci-biology/biosql dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:- src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=0b002dfc84485c315f3a837fdf29a6ba diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index d16284770deb..8bb3f0f23d6a 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=57636449f55fd44067e7024bcb3be832 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 index 2517885533da..6e3f09fdd5a9 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-network-9999-r1 @@ -8,5 +8,5 @@ LICENSE=Artistic GPL-2 RDEPEND=>=sci-biology/bioperl-9999 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build(-)] SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=637485289bf69287c429734619a346eb diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index b3a0f1d257e5..e3e00c837610 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=019ccce216c420ea65d9cf1925a8de4b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 index 450dd6016562..a4226f10a086 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-run-9999-r1 @@ -9,5 +9,5 @@ RDEPEND=>=sci-biology/bioperl-9999 !minimal? ( dev-perl/Algorithm-Diff dev-perl/ RESTRICT=test SLOT=0 _eclass_exported_funcs=src_unpack:git-2 src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=580d88609d793360e4dac4df84e90155 diff --git a/metadata/md5-cache/sci-biology/biopython-1.65 b/metadata/md5-cache/sci-biology/biopython-1.65 index 0bf63fe6c36b..b3255c29a342 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.65 +++ b/metadata/md5-cache/sci-biology/biopython-1.65 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_py SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.65.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=ed3332b0c893b27c66efacb74b25fabd diff --git a/metadata/md5-cache/sci-biology/biopython-1.66 b/metadata/md5-cache/sci-biology/biopython-1.66 index e970165b90fd..74b046cbf47a 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.66 +++ b/metadata/md5-cache/sci-biology/biopython-1.66 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_pypy python_targets_python2_7 python_targets_py SLOT=0 SRC_URI=http://www.biopython.org/DIST/biopython-1.66.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:distutils-r1 src_configure:distutils-r1 src_compile:distutils-r1 src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3603e7d618d57e8df35f95bd62c52c56 diff --git a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 index ce6e382f77f2..cf58cf397450 100644 --- a/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 +++ b/metadata/md5-cache/sci-biology/bioruby-1.4.3.0001-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( ruby_targets_ruby20 ) SLOT=0 SRC_URI=http://www.bioruby.org/archive/bioruby-1.4.3.0001.tar.gz _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=2b48b0bb84be40d6a0d45f6030a05821 diff --git a/metadata/md5-cache/sci-biology/bioruby-9999 b/metadata/md5-cache/sci-biology/bioruby-9999 index a0a6fa8eb9f0..e33c8b7cfff7 100644 --- a/metadata/md5-cache/sci-biology/bioruby-9999 +++ b/metadata/md5-cache/sci-biology/bioruby-9999 @@ -9,5 +9,5 @@ RDEPEND=ruby_targets_ruby20? ( dev-ruby/libxml[ruby_targets_ruby20] ) ruby_targe REQUIRED_USE=|| ( ruby_targets_ruby20 ) SLOT=0 _eclass_exported_funcs=pkg_setup:ruby-ng src_unpack:ruby-ng src_prepare:ruby-ng src_configure:ruby-ng src_compile:ruby-ng src_test:ruby-ng src_install:ruby-ng -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 ruby-fakegem 836f858624840907bbb6ae6f2c881cb7 ruby-ng 3b6431b487e69b5070a45ea20d1c4c6c ruby-utils 2f896785ed65442d7e84ab5f5eef3bd3 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=f1c6444e37e5e84f077e43b84b1a2c75 diff --git a/metadata/md5-cache/sci-biology/blat-34 b/metadata/md5-cache/sci-biology/blat-34 index 8de68ce95598..d4ebfc8a4133 100644 --- a/metadata/md5-cache/sci-biology/blat-34 +++ b/metadata/md5-cache/sci-biology/blat-34 @@ -8,5 +8,5 @@ LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=54aad31b5a90dc0387ba6c87ba539ff1 diff --git a/metadata/md5-cache/sci-biology/blat-34-r1 b/metadata/md5-cache/sci-biology/blat-34-r1 index 0186d9523baa..f0cc3826d564 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r1 +++ b/metadata/md5-cache/sci-biology/blat-34-r1 @@ -8,5 +8,5 @@ LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2fb31e749261157d1329bfdeb6b73c6b diff --git a/metadata/md5-cache/sci-biology/blossoc-1.4.0 b/metadata/md5-cache/sci-biology/blossoc-1.4.0 index 8c1b3dcdd7a7..b51908af6405 100644 --- a/metadata/md5-cache/sci-biology/blossoc-1.4.0 +++ b/metadata/md5-cache/sci-biology/blossoc-1.4.0 @@ -9,5 +9,5 @@ RDEPEND=sci-libs/gsl dev-libs/boost sci-biology/snpfile SLOT=0 SRC_URI=http://www.daimi.au.dk/~mailund/Blossoc/download/blossoc-1.4.0.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=7d43b42d61abc20f34b19ce387a4f72d diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2 b/metadata/md5-cache/sci-biology/bowtie-1.1.2 index 9c16a42932dd..2e251a8dce14 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2 @@ -9,5 +9,5 @@ LICENSE=Artistic SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=bea647a3059e7392734895f8719da851 diff --git a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 index c687209c9b2a..1cb848b616af 100644 --- a/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 +++ b/metadata/md5-cache/sci-biology/bowtie-1.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=tbb? ( dev-cpp/tbb ) SLOT=1 SRC_URI=mirror://sourceforge/bowtie-bio/bowtie-1.1.2-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3ffda47d0c02ed05ec45a657f7a10b19 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.6 b/metadata/md5-cache/sci-biology/bowtie-2.2.6 index 988d9a182cfb..965d0d45f6be 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.6 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.6 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.6/bowtie2-2.2.6-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5f8bf2d3f475b2c4c9d96b62096f7ab7 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9 index 5ffe2a5dd73a..1439c4580efb 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.9 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=7dd8090b15e166773555054785056f3f diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.12 b/metadata/md5-cache/sci-biology/bwa-0.7.12 index 228465738858..c4015bb3c0cf 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.12 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.12 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.12.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=fcc20ae2280da350669d2a27a7625237 diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.13 b/metadata/md5-cache/sci-biology/bwa-0.7.13 index e0af956a858b..d30b0b510496 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.13 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.13 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/bio-bwa/bwa-0.7.13.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=be14626749c3fc81b88277aeca8d63e0 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.5.1 b/metadata/md5-cache/sci-biology/cd-hit-4.5.1 index 7c0a7b683341..4fa2ee084269 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.5.1 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.5.1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://cdhit.googlecode.com/files/cd-hit-v4.5.1-2011-01-31.tgz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2219ae002375618957700246d19245ee diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.5.4 b/metadata/md5-cache/sci-biology/cd-hit-4.5.4 index c526da16cf66..1aac4ce63d4c 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.5.4 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.5.4 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://cdhit.googlecode.com/files/cd-hit-v4.5.4-2011-03-07.tgz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2341c46a3e214cc187e24ee6e9619a28 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6 index 96e634df5b67..c443d6975609 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=https://cdhit.googlecode.com/files/cd-hit-v4.6-2012-04-25.tgz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=8a2e925af92a3450f7d695bc78112d38 diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 index 1da895220119..e203b9466b6c 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=4e27f76eeb748a11d818033236165609 diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r3 b/metadata/md5-cache/sci-biology/clustalw-1.83-r3 index 58c66913313e..0081a2b59898 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r3 @@ -7,5 +7,5 @@ LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=d3c4e4fe400e259421328a7aed1776d9 diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 index 556c5f9b641e..f7277df4c499 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r1 @@ -10,5 +10,5 @@ RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=35aeabe13c3f17845ebe48287b554312 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 index 78bfe040edac..d11547041b30 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r1 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-qt/qtcore:4 dev-qt/qtgui:4 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz _eclass_exported_funcs=src_unpack:qt4-r2 src_prepare:- src_configure:qt4-r2 src_compile:qt4-r2 src_install:- -_eclasses_=base 3fe4f8980633fd7bc69e9887209ba2fe eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 qmake-utils 0a242e7177789b0028b4045f336dd4db qt4-r2 d6c113024bb3086a1facc65cd338930e toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=base 3fe4f8980633fd7bc69e9887209ba2fe eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 qmake-utils 0a242e7177789b0028b4045f336dd4db qt4-r2 d6c113024bb3086a1facc65cd338930e toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=46a1492fe4bfbbe5e2adc7a94fe7d5a6 diff --git a/metadata/md5-cache/sci-biology/consed-19-r2 b/metadata/md5-cache/sci-biology/consed-19-r2 index ced09be406c6..5918cc519045 100644 --- a/metadata/md5-cache/sci-biology/consed-19-r2 +++ b/metadata/md5-cache/sci-biology/consed-19-r2 @@ -10,5 +10,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=consed-19-sources.tar.gz consed-19-linux.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=87bace678f02004b19b2ab3b4e392aad diff --git a/metadata/md5-cache/sci-biology/consed-27 b/metadata/md5-cache/sci-biology/consed-27 index c4be19712c25..7b0d4c9835aa 100644 --- a/metadata/md5-cache/sci-biology/consed-27 +++ b/metadata/md5-cache/sci-biology/consed-27 @@ -10,5 +10,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=consed-27-sources.tar.gz consed-27-linux.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=aacf6ebdd167286a4e3ffcb214152b9b diff --git a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 index dfe66c0fb5bb..4cfd835684b1 100644 --- a/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 +++ b/metadata/md5-cache/sci-biology/cufflinks-2.2.1-r2 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/samtools:0.1-legacy >=dev-libs/boost-1.59.0:= dev-cpp/eigen: SLOT=0 SRC_URI=http://cufflinks.cbcb.umd.edu/downloads/cufflinks-2.2.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6b93e6dbae7355a08affefe4c39cf8dc diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 index 9b2124b2d593..64a7e0f42a6e 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=bebacda7b9082951500b83768cf250d1 diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1 index 85184f1c8e01..9ed3a24a3a51 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1 @@ -7,5 +7,5 @@ LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=ee98e826a5b57d9ea610cda6d19929da diff --git a/metadata/md5-cache/sci-biology/diya-1.0_rc4 b/metadata/md5-cache/sci-biology/diya-1.0_rc4 index 1852085bff67..59e34f9d4826 100644 --- a/metadata/md5-cache/sci-biology/diya-1.0_rc4 +++ b/metadata/md5-cache/sci-biology/diya-1.0_rc4 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/bioperl dev-perl/Data-Utilities dev-perl/XML-Simple !minimal SLOT=0 SRC_URI=mirror://sourceforge/diyg/files/diya/diya-1.0/diya-1.0-rc4.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:perl-module src_configure:perl-module src_compile:perl-module src_test:perl-module src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=fa0fc42a99b6d4398e74da15f5fa8b3e diff --git a/metadata/md5-cache/sci-biology/elph-0.1.5 b/metadata/md5-cache/sci-biology/elph-0.1.5 index 2c627677bd7a..17c0b5e9d606 100644 --- a/metadata/md5-cache/sci-biology/elph-0.1.5 +++ b/metadata/md5-cache/sci-biology/elph-0.1.5 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-0.1.5.tar.gz _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=fd17c47a2e8f2da8e6c3236a9e7dec89 diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1 b/metadata/md5-cache/sci-biology/elph-1.0.1 index 48e98930a918..dd267ae768f5 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=57736c0fadfb9a7f58d7b479b2ccecc6 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 index 5f7b1e7fcac6..81de2d269740 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.650.tar.gz -> embassy-cbstools-1.0.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=186a646a01796d80e96382eda18890f6 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 index 0acd855bd9e8..c44bbe7846b4 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plp SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.tar.gz -> embassy-clustalomega-1.1.0.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=78d217460299d444dd47ef25eccc6780 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 index 608bc7d38b47..eadf51bfff76 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.650.tar.gz -> embassy-domainatrix-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=63b5b0b16a577be381e2872c78742942 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 index e024bdcb3878..54de2f36e3fd 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.650.tar.gz -> embassy-domalign-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=af2fa82680f0057751ab091d1c0de659 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 index 2e7ed605ee5b..4a3b0573943b 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.650.tar.gz -> embassy-domsearch-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=4f3855b8861141c88bf0c4c267e34074 diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 index 4e9248c8822e..d740a5d4d931 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.650-r1 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses:= ) dev-libs/expat dev-libs/libpcre:3 sci-li SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.650.tar.gz -> embassy-emnu-1.05.650-r1.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=8dbc38e69d33e3dab2515755b7bdb388 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 index a0888e9f0e82..cc5d5acb1402 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.650.tar.gz -> embassy-esim4-1.0.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=372a55d64865de9d88f2b796cfe2c8e6 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 index 5c0502b24acb..6078e31314a8 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.650 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/hmmer dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys- SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.650.tar.gz -> embassy-hmmer-2.3.2.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=b64d4a79867d45d7cc2bad22451b0d0b diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 index 73954e96238b..4e4133727d56 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.650.tar.gz -> embassy-iprscan-4.3.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2be3be220e11153b8999ac69cad1485c diff --git a/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 b/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 index e52b9689d011..f6fab2eddd34 100644 --- a/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 +++ b/metadata/md5-cache/sci-biology/embassy-meme-4.7.650 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/meme dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-l SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.650.tar.gz -> embassy-meme-4.7.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=aeca403317a95de25a390eef8bc0d435 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 index 412d5ec87ac6..2eee1e43758b 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.650 @@ -10,5 +10,5 @@ RDEPEND=ncurses? ( sys-libs/ncurses ) dev-libs/expat dev-libs/libpcre:3 sci-libs SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.650.tar.gz -> embassy-mse-3.0.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=c282ceaf2e8cc53eba54fac7023c9a60 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 index 6d4a874d2be9..38599d7b6407 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.650.tar.gz -> embassy-phylipnew-3.69.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=27ce1ba3779bb97b11294e369862e616 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 index 48c1539c781c..774cbc549191 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.650.tar.gz -> embassy-signature-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5dac08ee358b394884c4fe4b53a1f065 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 index bb84552ce828..c22477b1ac4b 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.650.tar.gz -> embassy-structure-0.1.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=a6af3b3439050d2ecb65956c012c92ba diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 index bca87ab38def..a98017527a4c 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.650.tar.gz -> embassy-topo-2.0.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=0edf6a1e13a42a6a8bc4050386b71ddd diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 index 31c398f72841..6a0a7eed5b5d 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.650 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-libs/zlib mysql? ( SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.650.tar.gz -> embassy-vienna-1.7.2.650.tar.gz _eclass_exported_funcs=src_prepare:emboss-r1 src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=ebea12eb95dc9f0deba32a8853c44f7c diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0 b/metadata/md5-cache/sci-biology/emboss-6.6.0 index 2c9fc6bc93af..977db3af467c 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0 @@ -11,5 +11,5 @@ RDEPEND=!sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot sys-li SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:emboss-r1 src_configure:emboss-r1 src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb emboss-r1 4845d0df55fa82758c20d0fb0ef1a2a2 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 readme.gentoo-r1 03878c06495db70bc36bd717383c09f7 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=9081585d2b6ad228f4eecfaf146f3eda diff --git a/metadata/md5-cache/sci-biology/eugene-4.1 b/metadata/md5-cache/sci-biology/eugene-4.1 index a21cef2f98f0..4ba858fa93f2 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1 +++ b/metadata/md5-cache/sci-biology/eugene-4.1 @@ -10,5 +10,5 @@ RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1157/eugene-4.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=f64907e857ca8ed5db03a3315cc74e33 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 index d1cc7c9a0fb1..2a29f96adb46 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) SLOT=0 SRC_URI=http://www.ebi.ac.uk/~guy/exonerate/exonerate-2.2.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=178b12fcf2b0c150e6145c1d28525a7b diff --git a/metadata/md5-cache/sci-biology/express-0.9.5 b/metadata/md5-cache/sci-biology/express-0.9.5 index 06ae193ccc2b..ec3901273951 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5 +++ b/metadata/md5-cache/sci-biology/express-0.9.5 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=010fdb416bdadb2983034b01eb9b8f58 diff --git a/metadata/md5-cache/sci-biology/express-0.9.5-r1 b/metadata/md5-cache/sci-biology/express-0.9.5-r1 index 03a446ad5ae1..13667e98d873 100644 --- a/metadata/md5-cache/sci-biology/express-0.9.5-r1 +++ b/metadata/md5-cache/sci-biology/express-0.9.5-r1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= sys-libs/zlib sci-biology/bamtools SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-0.9.5/express-0.9.5-src.tgz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3bc7636082b31abb4ab2b71a0a941a81 diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index b15079bed8f7..0eadfb864d6e 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sy SLOT=0 SRC_URI=http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz _eclass_exported_funcs=src_prepare:cmake-utils src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=c2f687191454c4316a3ee0917423a42f diff --git a/metadata/md5-cache/sci-biology/fasta-35.4.10 b/metadata/md5-cache/sci-biology/fasta-35.4.10 index 152bd6ba1118..f3b27635f7a5 100644 --- a/metadata/md5-cache/sci-biology/fasta-35.4.10 +++ b/metadata/md5-cache/sci-biology/fasta-35.4.10 @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta3/fasta-35.4.10.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=45693968b9680c3c6bfd9a05d54dc62a diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index 4bc438473d8f..aacb50f0b805 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -9,5 +9,5 @@ LICENSE=fasta SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3f2fe79adf516da76e4ecbb185cad0bc diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.7 b/metadata/md5-cache/sci-biology/fasttree-2.1.7 index 54481c5468a3..2bcde728194d 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.7 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.7 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.7.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.7.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.7.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=61aa89b01dafa750683148d15dde6e52 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.8 b/metadata/md5-cache/sci-biology/fasttree-2.1.8 index b6ae03bb024c..a9d3e3df73a3 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.8 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.8 @@ -10,5 +10,5 @@ REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.8.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.8.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=a57c162d671d45c02f889b16b5bdb38e diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 b/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 index 2f8cf5c5f4d9..f40089c533ed 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.3.6-r2 @@ -9,5 +9,5 @@ RESTRICT=mirror bindist strip SLOT=0 SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.3/fahclient_7.3.6-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.3/fahclient_7.3.6-64bit-release.tar.bz2 ) _eclass_exported_funcs=pkg_preinst:- pkg_postrm:- pkg_postinst:- pkg_setup:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c user 906f3c8eb3a2350a4f1191a89baa3e46 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e user 906f3c8eb3a2350a4f1191a89baa3e46 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3c0aaea43823b5adf947c6a0e5090ec3 diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.4.4 b/metadata/md5-cache/sci-biology/foldingathome-7.4.4 index 476173db8e38..986197d14d2e 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.4.4 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.4.4 @@ -9,5 +9,5 @@ RESTRICT=mirror bindist strip SLOT=0 SRC_URI=x86? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.5-32bit/v7.4/fahclient_7.4.4-32bit-release.tar.bz2 ) amd64? ( https://fah.stanford.edu/file-releases/public/release/fahclient/centos-5.3-64bit/v7.4/fahclient_7.4.4-64bit-release.tar.bz2 ) _eclass_exported_funcs=pkg_preinst:- pkg_postrm:- pkg_postinst:- pkg_setup:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c user 906f3c8eb3a2350a4f1191a89baa3e46 versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e user 906f3c8eb3a2350a4f1191a89baa3e46 versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=9242ae0fc742c83a08f28417712e5fe3 diff --git a/metadata/md5-cache/sci-biology/gatk-2.4 b/metadata/md5-cache/sci-biology/gatk-2.4 index 03067a5321cf..87b12ac726d9 100644 --- a/metadata/md5-cache/sci-biology/gatk-2.4 +++ b/metadata/md5-cache/sci-biology/gatk-2.4 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 SRC_URI=https://github.com/broadgsa/gatk/archive/2.4.tar.gz -> gatk-2.4.tar.gz _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:vcs-snapshot src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c vcs-snapshot b45be87e7012be0af8424e8a5644da1d versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e vcs-snapshot b45be87e7012be0af8424e8a5644da1d versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=6e7edd964ee7eedfb9d0941dd49b840e diff --git a/metadata/md5-cache/sci-biology/gatk-9999 b/metadata/md5-cache/sci-biology/gatk-9999 index 89ebf700ab31..434a87e534ac 100644 --- a/metadata/md5-cache/sci-biology/gatk-9999 +++ b/metadata/md5-cache/sci-biology/gatk-9999 @@ -8,5 +8,5 @@ LICENSE=MIT RDEPEND=>=virtual/jre-1.6 >=dev-java/java-config-2.2.0-r3 SLOT=0 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_unpack:git-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde git-2 672c3929a162f221a53b4ccb4d25d8a2 java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=87fbeadb7427c25b13f5837263f8939f diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index af40449ec8e0..32b3dcb65e3a 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3330594e03e29a02e3796906b02101a9 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 index 2e6d514a7d69..4d2ac2fab4cb 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02-r3 +++ b/metadata/md5-cache/sci-biology/glimmer-3.02-r3 @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=http://www.cbcb.umd.edu/software/glimmer/glimmer302.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=e88e62a74099bfe5158b5dcc02b5b282 diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index c02fe8e7df00..d8118f779058 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -8,5 +8,5 @@ RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=http://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=0548d7bfa5d5a7de4e2265a7038e3c0b diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index e0bc7cccdd5c..dc9e951cb8e5 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -7,5 +7,5 @@ LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz _eclass_exported_funcs=src_unpack:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=b42c827c4d6dc5e11c3d97315cf87522 diff --git a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 index f70225ab3ba4..be9abe70cfb6 100644 --- a/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 +++ b/metadata/md5-cache/sci-biology/gmap-2015.12.31.5 @@ -7,5 +7,5 @@ LICENSE=gmap SLOT=0 SRC_URI=http://research-pub.gene.com/gmap/src/gmap-gsnap-2015-12-31.v5.tar.gz _eclass_exported_funcs=- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=cb95c1947d1ab705cdf541bd023bbab0 diff --git a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 index c868343f4702..9b66ed437192 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.7.3-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=9219a99b4f7b7c8512cccd71e06d15fc diff --git a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 index 712975f7df23..b25a5002a58a 100644 --- a/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 +++ b/metadata/md5-cache/sci-biology/goby-1.9.8.1-r1 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/commons-logging dev-java/commons-lang:2.1 dev SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-src.zip http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-deps.zip _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:- src_configure:java-ant-2 src_compile:java-pkg-2 src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=57855a2736a8db9f1db955ee8eff9f68 diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 index 8e016cb412e3..73709d69828a 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.7.3 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.7.3/goby_1.9.7.3-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6524b71bf3ee0d73c02c9301388b3806 diff --git a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 index f1b5d376016d..b94aa11f270c 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-1.9.8.1 @@ -9,5 +9,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_1.9.8.1/goby_1.9.8.1-cpp.zip _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=dd885c4ec853b595e8d09da5e5237c55 diff --git a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 index e38df4bbb63a..f6d68c421ae8 100644 --- a/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 +++ b/metadata/md5-cache/sci-biology/goby-cpp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/protobuf-2.4.1 >=dev-libs/libpcre-8.12 SLOT=0 SRC_URI=http://chagall.med.cornell.edu/goby/releases/archive/release-goby_2.0.1/goby_2.0.1-cpp.zip _eclass_exported_funcs=src_prepare:- src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3119d3d694fd7478ab452660b5ae4d25 diff --git a/metadata/md5-cache/sci-biology/hmmer-3.0 b/metadata/md5-cache/sci-biology/hmmer-3.0 index 9af9fdbc9bec..17eae39c0b24 100644 --- a/metadata/md5-cache/sci-biology/hmmer-3.0 +++ b/metadata/md5-cache/sci-biology/hmmer-3.0 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) gsl? ( >=sci-libs/gsl-1.12 ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/hmmer3/3.0/hmmer-3.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2cae24445997ef6c055ce2a697c2e91a diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index dfb6df227d10..81083d268a9a 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=d1b6a914aed303aeffb28f45b2c79809 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index 051745e62e13..b77bfe1e0c8f 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=34e807b33fc0c63f6787bf849c22463c diff --git a/metadata/md5-cache/sci-biology/iqpnni-3.3.1 b/metadata/md5-cache/sci-biology/iqpnni-3.3.1 index 86d17d96d079..c231154ccc53 100644 --- a/metadata/md5-cache/sci-biology/iqpnni-3.3.1 +++ b/metadata/md5-cache/sci-biology/iqpnni-3.3.1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.cibiv.at/software/iqpnni/iqpnni-3.3.1.tar.gz _eclass_exported_funcs=src_unpack:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=dc248238a134cf774f639816f37ba711 diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r1 b/metadata/md5-cache/sci-biology/kalign-2.03-r1 index 49829358e56c..cbf753c95561 100644 --- a/metadata/md5-cache/sci-biology/kalign-2.03-r1 +++ b/metadata/md5-cache/sci-biology/kalign-2.03-r1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=cd6a281d28847a3a6b06b4b6480d19c7 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r1 b/metadata/md5-cache/sci-biology/lagan-2.0-r1 index 73de68b25f35..77320412b5b9 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r1 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=997a304caaa256e8cc911b8fe42218da diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r2 b/metadata/md5-cache/sci-biology/lagan-2.0-r2 index d76b5d85f294..406a01353873 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r2 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=e01561c3832a9482b899eeba458cd900 diff --git a/metadata/md5-cache/sci-biology/last-230 b/metadata/md5-cache/sci-biology/last-230 index c2906dc5609c..00f0a78bac9b 100644 --- a/metadata/md5-cache/sci-biology/last-230 +++ b/metadata/md5-cache/sci-biology/last-230 @@ -8,5 +8,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://last.cbrc.jp/archive/last-230.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6aa3748656a0bb109728381325810807 diff --git a/metadata/md5-cache/sci-biology/last-299 b/metadata/md5-cache/sci-biology/last-299 index 4e8de0c8e36f..e455ecd70975 100644 --- a/metadata/md5-cache/sci-biology/last-299 +++ b/metadata/md5-cache/sci-biology/last-299 @@ -9,5 +9,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://last.cbrc.jp/last-299.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=63fdd8e13d2df571e24d48edb9eb0ab9 diff --git a/metadata/md5-cache/sci-biology/mafft-7.050 b/metadata/md5-cache/sci-biology/mafft-7.050 index 88b30e59cbda..4bf7b3432bca 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.050 +++ b/metadata/md5-cache/sci-biology/mafft-7.050 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.050-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=801f7688176caf432098521680ab98e4 diff --git a/metadata/md5-cache/sci-biology/mafft-7.215 b/metadata/md5-cache/sci-biology/mafft-7.215 index 19b8427c3a16..74f199247e54 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.215 +++ b/metadata/md5-cache/sci-biology/mafft-7.215 @@ -8,5 +8,5 @@ LICENSE=BSD SLOT=0 SRC_URI=http://mafft.cbrc.jp/alignment/software/mafft-7.215-without-extensions-src.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=a5ad6198a26e60e10813e00447962396 diff --git a/metadata/md5-cache/sci-biology/mammoth-1.0-r1 b/metadata/md5-cache/sci-biology/mammoth-1.0-r1 index 73f2d6843911..6c32fd5afa80 100644 --- a/metadata/md5-cache/sci-biology/mammoth-1.0-r1 +++ b/metadata/md5-cache/sci-biology/mammoth-1.0-r1 @@ -10,5 +10,5 @@ RESTRICT=fetch SLOT=0 SRC_URI=mammoth-1.0-src.tgz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=ec1885f686d8996fc43bc556a7e9f720 diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r1 b/metadata/md5-cache/sci-biology/maq-0.7.1-r1 index b777bf68b56a..72bb6cd713b8 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r1 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r1 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=f5f3d4b18ceb0e7841a7e5ffd2939e6b diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 index 13d0a722ae37..8219f0edaba0 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r2 @@ -9,5 +9,5 @@ RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz _eclass_exported_funcs=src_prepare:autotools-utils src_configure:autotools-utils src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2eb00dc303b46d118cadda5d1bdf1289 diff --git a/metadata/md5-cache/sci-biology/mcl-08.312 b/metadata/md5-cache/sci-biology/mcl-08.312 index a21826f9954b..c10fcbc5be6c 100644 --- a/metadata/md5-cache/sci-biology/mcl-08.312 +++ b/metadata/md5-cache/sci-biology/mcl-08.312 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-08-312.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=86f20cc60ef5d1547df487e8647393c1 diff --git a/metadata/md5-cache/sci-biology/mcl-12.135 b/metadata/md5-cache/sci-biology/mcl-12.135 index 166a97693d07..1d8fac4cfca0 100644 --- a/metadata/md5-cache/sci-biology/mcl-12.135 +++ b/metadata/md5-cache/sci-biology/mcl-12.135 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-12-135.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=86f20cc60ef5d1547df487e8647393c1 diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index dac1cdcc2bc0..6171e0748377 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=ddf4fd48049964197b24a486c98503f4 diff --git a/metadata/md5-cache/sci-biology/meme-4.8.1-r2 b/metadata/md5-cache/sci-biology/meme-4.8.1-r2 index 592f4a4383b4..7ef5bec529d4 100644 --- a/metadata/md5-cache/sci-biology/meme-4.8.1-r2 +++ b/metadata/md5-cache/sci-biology/meme-4.8.1-r2 @@ -10,5 +10,5 @@ RDEPEND=app-shells/tcsh dev-libs/libxml2:2 dev-libs/libxslt mpi? ( virtual/mpi ) SLOT=0 SRC_URI=http://meme.nbcr.net/downloads/meme_4.8.1.tar.gz _eclass_exported_funcs=pkg_setup:python src_prepare:- src_configure:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3da487080e0d3a3f0051709b0f0c2cb5 diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2 b/metadata/md5-cache/sci-biology/mira-4.0.2 index bf0ac28b2746..f1f0ad720631 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost[threads] dev-util/google-perftools SLOT=0 SRC_URI=http://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=274ea72ac3aafd6c1b3dcc87329c1f5c diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 4f7cc639ab07..7e65a07d7520 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=http://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=b42407a0fafab0d97c3f25952ab2fdf8 diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 index 78f3cf371782..5d54900915b9 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=cbcfd648e8584c43dc080e4afca5f038 diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index 7f7e20ac74c7..985ef5031783 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0 SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=10613055652e0833992483376dd596e8 diff --git a/metadata/md5-cache/sci-biology/mummer-3.20 b/metadata/md5-cache/sci-biology/mummer-3.20 index a5ef465fe36a..948567bfd631 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.20 +++ b/metadata/md5-cache/sci-biology/mummer-3.20 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.20.tar.gz _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=34bc41bb6f0e306a25a82485615b429d diff --git a/metadata/md5-cache/sci-biology/mummer-3.21 b/metadata/md5-cache/sci-biology/mummer-3.21 index a7d4aaeb4f8c..455d77618439 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.21 +++ b/metadata/md5-cache/sci-biology/mummer-3.21 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.21.tar.gz _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=f7c3a4036f4bc40e941f2e0507d5e094 diff --git a/metadata/md5-cache/sci-biology/mummer-3.22-r1 b/metadata/md5-cache/sci-biology/mummer-3.22-r1 index 2cc35a342b8c..96daa09d35cd 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.22-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.22-r1 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.22.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=442826d5952762aeb80a630690097f2d diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index ae09f86e6c99..e091f04dc7a2 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=66098426576b0d39431bfb0549bbeafd diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 index 3342a309776c..002ff48e7492 100644 --- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 +++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r2 @@ -10,5 +10,5 @@ RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= X? ( media-libs/fontc SLOT=0 SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=18c39254e961f1799e6ad5e5408ed52e diff --git a/metadata/md5-cache/sci-biology/njplot-2.3 b/metadata/md5-cache/sci-biology/njplot-2.3 index 0b061f0212e4..81c2c50572ff 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3 +++ b/metadata/md5-cache/sci-biology/njplot-2.3 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=1dedd3c07f1b65c208b003067cd68cf0 diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r1 b/metadata/md5-cache/sci-biology/njplot-2.3-r1 index 74efc032b35a..f63fa1a6b352 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3-r1 +++ b/metadata/md5-cache/sci-biology/njplot-2.3-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=430ef4440179017c19c01eb71d3014f4 diff --git a/metadata/md5-cache/sci-biology/pals-1.0 b/metadata/md5-cache/sci-biology/pals-1.0 index f165957db897..a6a2b2c78b73 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0 +++ b/metadata/md5-cache/sci-biology/pals-1.0 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/pals-1.0.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=e0ef21df5e1b1a15fd4532b3a9d6e6b7 diff --git a/metadata/md5-cache/sci-biology/paml-4.4c-r1 b/metadata/md5-cache/sci-biology/paml-4.4c-r1 index 8f07eb568761..f14916968120 100644 --- a/metadata/md5-cache/sci-biology/paml-4.4c-r1 +++ b/metadata/md5-cache/sci-biology/paml-4.4c-r1 @@ -7,5 +7,5 @@ LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.4c.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=a2299253a4624fe8430541631d399349 diff --git a/metadata/md5-cache/sci-biology/phylip-3.69-r1 b/metadata/md5-cache/sci-biology/phylip-3.69-r1 index e75ee740c354..d1762fd3da6d 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.69-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.69-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.69.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=fb82491d16d5f2daf7dbdac4f7a7003f diff --git a/metadata/md5-cache/sci-biology/phylip-3.696-r1 b/metadata/md5-cache/sci-biology/phylip-3.696-r1 index 3c45d07583f3..2c6f0427c82d 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.696-r1 +++ b/metadata/md5-cache/sci-biology/phylip-3.696-r1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXaw SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.696.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=cbbb1bb5348a56ae12c42eca9a00d14e diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 index 1f92ac82898c..a4f972990f35 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6152894472e86fac62cd4a6e05ad553e diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index f49fd0e16cba..89b6fc38736a 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 _eclass_exported_funcs=pkg_preinst:java-pkg-2 pkg_setup:java-pkg-2 src_prepare:java-pkg-2 src_configure:java-ant-2 src_compile:java-pkg-2 src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde java-ant-2 7c5d0c274d390745f5033754a319f515 java-pkg-2 b02dc1e46b3648e467b5fbdf7857cf28 java-utils-2 9a25f292ff66f8c2c00100ac0b15c54f multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=f33422ec9832c259cea81a18a74a8503 diff --git a/metadata/md5-cache/sci-biology/piler-1.0 b/metadata/md5-cache/sci-biology/piler-1.0 index fe0734592062..78a7e18a7e89 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0 +++ b/metadata/md5-cache/sci-biology/piler-1.0 @@ -8,5 +8,5 @@ RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=mirror://gentoo/piler-1.0.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=21b4e96ca4b5ec6e0b82c8f783b16377 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0 b/metadata/md5-cache/sci-biology/pilercr-1.0 index b3b82313f825..feb28a255818 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/pilercr-1.0.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=aa8c595d04f385296c2672be29f21d38 diff --git a/metadata/md5-cache/sci-biology/plink-1.07-r1 b/metadata/md5-cache/sci-biology/plink-1.07-r1 index be0c913371b5..81a5040cc4d8 100644 --- a/metadata/md5-cache/sci-biology/plink-1.07-r1 +++ b/metadata/md5-cache/sci-biology/plink-1.07-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib lapack? ( virtual/lapack ) SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/plink/dist/plink-1.07-src.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=1514de2a10550eec3709c846e4e3f075 diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index fe8a3e9d1315..d2054a8ccfb5 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -9,5 +9,5 @@ RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=0bc8bcce219140bdc4ef2672a457932a diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index 0bc354856206..723e1fd5373c 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=c694b3bde674902a9601f856356cf311 diff --git a/metadata/md5-cache/sci-biology/prank-100701 b/metadata/md5-cache/sci-biology/prank-100701 index 044556bd18de..81bf954410f3 100644 --- a/metadata/md5-cache/sci-biology/prank-100701 +++ b/metadata/md5-cache/sci-biology/prank-100701 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.ebi.ac.uk/goldman-srv/prank/src/prank/prank.src.100701.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=99862c8618b27fc12eab5d6cb0c23ae6 diff --git a/metadata/md5-cache/sci-biology/prank-111130 b/metadata/md5-cache/sci-biology/prank-111130 index 6f721a9a1859..44ec3ff39617 100644 --- a/metadata/md5-cache/sci-biology/prank-111130 +++ b/metadata/md5-cache/sci-biology/prank-111130 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=https://prank-msa.googlecode.com/files/prank.src.111130.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=bd13e7f3e9d7aaabf98c6d09eef515de diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603 index e7a5230b5bb3..8ddbf97ef26c 100644 --- a/metadata/md5-cache/sci-biology/prank-140603 +++ b/metadata/md5-cache/sci-biology/prank-140603 @@ -7,5 +7,5 @@ LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=a78b8fe781e96a7748fe5d249d518725 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.5 b/metadata/md5-cache/sci-biology/primer3-2.3.5 index fe6aeaa1f3f8..cb2aeefdab2c 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.5 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.5 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.5/primer3-2.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=89df84d198ccabc6e171bd151b0d86e4 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.6 b/metadata/md5-cache/sci-biology/primer3-2.3.6 index e7c0a2987869..74f569c70488 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.6 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/primer3/2.3.6/primer3-src-2.3.6.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=fbc5952f543d327fcb6b99cf43241909 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index 3cd04d83e45b..c2d8b4d9b3c4 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2d22589e3f0ecb3ac49bc9fde62ab1f2 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index b8ad2a377c72..9ea2de7f81f8 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -8,5 +8,5 @@ RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=7832c26904cb58b1ed5527c9b9cae1c8 diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.39 b/metadata/md5-cache/sci-biology/profphd-1.0.39 index f1f6446b1ffe..821f22f64501 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.39 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.39 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.39.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=d6903679ef8eac2c123c4556ef80c8ec diff --git a/metadata/md5-cache/sci-biology/profphd-1.0.40 b/metadata/md5-cache/sci-biology/profphd-1.0.40 index 46e4a94cd206..7b16532291fb 100644 --- a/metadata/md5-cache/sci-biology/profphd-1.0.40 +++ b/metadata/md5-cache/sci-biology/profphd-1.0.40 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl dev-perl/librg-utils-perl sci-libs/profnet sci-libs/profph SLOT=0 SRC_URI=ftp://rostlab.org/profphd/profphd-1.0.40.tar.xz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5278fe0b86d8b4447a0f4492214757a0 diff --git a/metadata/md5-cache/sci-biology/psipred-3.1 b/metadata/md5-cache/sci-biology/psipred-3.1 index 1028d89fe6ff..3f1ce0d28c78 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.1 +++ b/metadata/md5-cache/sci-biology/psipred-3.1 @@ -8,5 +8,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred31.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=059ee957489f4c11d1c0946924cb3a7f diff --git a/metadata/md5-cache/sci-biology/psipred-3.2 b/metadata/md5-cache/sci-biology/psipred-3.2 index db0de0ef3474..882f3a49af6d 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.2 +++ b/metadata/md5-cache/sci-biology/psipred-3.2 @@ -8,5 +8,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred32.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=3048d78763d0d830803b3252e9728250 diff --git a/metadata/md5-cache/sci-biology/psipred-3.2.1 b/metadata/md5-cache/sci-biology/psipred-3.2.1 index 3cc03e690049..0a59f10d64aa 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.2.1 +++ b/metadata/md5-cache/sci-biology/psipred-3.2.1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred321.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=2ad13218bde0c6cf5a5ab5caee939086 diff --git a/metadata/md5-cache/sci-biology/psipred-3.3 b/metadata/md5-cache/sci-biology/psipred-3.3 index 33afe8cffe45..d355a850501c 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.3 +++ b/metadata/md5-cache/sci-biology/psipred-3.3 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/ncbi-tools || ( sci-biology/update-blastdb sci-biology/ncbi- SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.3.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=369220ea4bf38d546a107d8503320973 diff --git a/metadata/md5-cache/sci-biology/psipred-3.4 b/metadata/md5-cache/sci-biology/psipred-3.4 index 9ac24a1d13e7..868104d6b8ad 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.4 +++ b/metadata/md5-cache/sci-biology/psipred-3.4 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.4.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8cae719195a0bc1655657fc75a690b0f diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5 index 598546e3c82f..79f011c41f6b 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.5 +++ b/metadata/md5-cache/sci-biology/psipred-3.5 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools || ( sci-biology/update-blastdb s SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 prefix e7f2b9c6e57342e5d25eac22fce23062 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8cae719195a0bc1655657fc75a690b0f diff --git a/metadata/md5-cache/sci-biology/pysam-0.9.0 b/metadata/md5-cache/sci-biology/pysam-0.9.0 index d5a832f63f12..ecf352dbaa65 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.9.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.9.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 python_targe SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.9.0.tar.gz -> pysam-0.9.0.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:distutils-r1 src_compile:- src_test:distutils-r1 src_install:distutils-r1 -_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=distutils-r1 3a17743abcc9335483329f33c87b472d multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=4347b0e64a8de2968bb9d80fc701d2ea diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 index 6b54a4aa4b58..97212c6b2a50 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl sci-biology/hmmer SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=a604c43b2c62327815727613b2748c6f diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index dde7ef910cdc..a2f1ea50a49e 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -9,5 +9,5 @@ REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6ce26877e006d2d080de7e0b2d55a7b7 diff --git a/metadata/md5-cache/sci-biology/recon-1.06-r1 b/metadata/md5-cache/sci-biology/recon-1.06-r1 index 2f8b892495fb..1e90f0516139 100644 --- a/metadata/md5-cache/sci-biology/recon-1.06-r1 +++ b/metadata/md5-cache/sci-biology/recon-1.06-r1 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON1.06.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5dc463aa504ef23ac98031de21caed4e diff --git a/metadata/md5-cache/sci-biology/recon-1.06-r2 b/metadata/md5-cache/sci-biology/recon-1.06-r2 index 98e905e950ed..72a7f18a9259 100644 --- a/metadata/md5-cache/sci-biology/recon-1.06-r2 +++ b/metadata/md5-cache/sci-biology/recon-1.06-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON1.06.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3e653eec95c5d1dbd63cd1cdc1e98b06 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index 4a38da8ada4c..8c8e9584b545 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=4c288235ce00754a3b76fa3068a818b2 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713 b/metadata/md5-cache/sci-biology/rnaview-20040713 index b957e9055ef8..3206c0357ea1 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_unpack:- src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=fe3a0b850dcdb0fcd3c4b8ff9be47b48 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r2 b/metadata/md5-cache/sci-biology/rnaview-20040713-r2 index c14780fe0bd9..5cf2c352cc0d 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r2 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r2 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=22ccaa60a98821105bd95c1f49baf5d0 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r3 b/metadata/md5-cache/sci-biology/rnaview-20040713-r3 index d617f259fc29..3fb67660dddb 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r3 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r3 @@ -7,5 +7,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=e7277ead215a53f06aa591bc3dcea8a1 diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 index 2c97d2f5c35b..4387bd6fe457 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.19-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-0.1.19.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=386582eb3ff9435a92dd20bdbd248cbc diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r2 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r2 index 53e2da826bfa..782c9289060b 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r2 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=9e04100e7a9246f6b77261416f9c77c4 diff --git a/metadata/md5-cache/sci-biology/samtools-1.0 b/metadata/md5-cache/sci-biology/samtools-1.0 index 3568d9d7f474..5cdeb7a78932 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0 +++ b/metadata/md5-cache/sci-biology/samtools-1.0 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=db99b61f10fd031a95c3ba948438e007 diff --git a/metadata/md5-cache/sci-biology/samtools-1.0-r1 b/metadata/md5-cache/sci-biology/samtools-1.0-r1 index 92e180f2efda..7786d9c91ead 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.0-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.0-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.0.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=cf94159379e0b14da650368a72d518dd diff --git a/metadata/md5-cache/sci-biology/samtools-1.1 b/metadata/md5-cache/sci-biology/samtools-1.1 index ea8ee30093a0..4c633d092749 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.1 +++ b/metadata/md5-cache/sci-biology/samtools-1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.1.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=9233bca436af5041a19d8326e816d011 diff --git a/metadata/md5-cache/sci-biology/samtools-1.2 b/metadata/md5-cache/sci-biology/samtools-1.2 index 5cb7d6a9c4c2..8a30ddcdfa85 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.2 +++ b/metadata/md5-cache/sci-biology/samtools-1.2 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.2.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=75d7314287663a3f5ea5b17060bd2081 diff --git a/metadata/md5-cache/sci-biology/samtools-1.3-r1 b/metadata/md5-cache/sci-biology/samtools-1.3-r1 index 28a1d9960803..51d13933dce6 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.3-r1 +++ b/metadata/md5-cache/sci-biology/samtools-1.3-r1 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python2_7 ) SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.3.tar.bz2 _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=bf4d95b9d61aabecfc5d1eb4039ebc7d diff --git a/metadata/md5-cache/sci-biology/seaview-4.3.5 b/metadata/md5-cache/sci-biology/seaview-4.3.5 index 298ea2f42d02..6fa80a7799c6 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.3.5 +++ b/metadata/md5-cache/sci-biology/seaview-4.3.5 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.5.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=9d788d989511d355673d31e81a3f34e8 diff --git a/metadata/md5-cache/sci-biology/seaview-4.5.4 b/metadata/md5-cache/sci-biology/seaview-4.5.4 index 9c3f203b2435..6b8c6508a200 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.5.4 +++ b/metadata/md5-cache/sci-biology/seaview-4.5.4 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib x11-libs/fltk:1 x11-libs/libX11 xft? ( x11-libs/libXft x11 SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.5.4.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6226d6428885158b7d6d73e153e2ae2f diff --git a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 index 70194c7c20e9..8b2f6d197b42 100644 --- a/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 +++ b/metadata/md5-cache/sci-biology/seqan-1.4.2-r1 @@ -10,5 +10,5 @@ REQUIRED_USE=python_targets_python2_7 cpu_flags_x86_sse4_1 SLOT=1.4 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-1.4.2.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_configure:- src_compile:cmake-utils src_test:cmake-utils src_install:- -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=33a44ba69cb29b108cba8aebccd91632 diff --git a/metadata/md5-cache/sci-biology/seqan-2.1.1 b/metadata/md5-cache/sci-biology/seqan-2.1.1 index 9aabfb9cfaa7..44d1c340ab62 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.1.1 +++ b/metadata/md5-cache/sci-biology/seqan-2.1.1 @@ -10,5 +10,5 @@ REQUIRED_USE=python_targets_python2_7 cpu_flags_x86_sse4_1 SLOT=2.1 SRC_URI=http://packages.seqan.de/seqan-src/seqan-src-2.1.1.tar.gz _eclass_exported_funcs=pkg_setup:python-single-r1 src_prepare:- src_configure:- src_compile:- src_test:cmake-utils src_install:- -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=2415e0c180b4739d2eb92f3ee7789206 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.0.1 b/metadata/md5-cache/sci-biology/shrimp-2.0.1 index 420597cc0252..283bee643337 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.0.1 +++ b/metadata/md5-cache/sci-biology/shrimp-2.0.1 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/emboss !sci-mathematics/cado-nfs SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_0_1.src.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=ca9f79b1dc8cc6c457969f3bfc6dad48 diff --git a/metadata/md5-cache/sci-biology/shrimp-2.2.3 b/metadata/md5-cache/sci-biology/shrimp-2.2.3 index b97dd995ab61..feae3eaf4600 100644 --- a/metadata/md5-cache/sci-biology/shrimp-2.2.3 +++ b/metadata/md5-cache/sci-biology/shrimp-2.2.3 @@ -11,5 +11,5 @@ REQUIRED_USE=python_targets_python2_7 SLOT=0 SRC_URI=http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_2_2_3.src.tar.gz _eclass_exported_funcs=pkg_pretend:- pkg_setup:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=4f8021ced803372cddeb27e1a3b6521c diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index db277c76c2cb..25fdfec6bd36 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=9df129026fb913d20a07f5dd4658f408 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r1 b/metadata/md5-cache/sci-biology/sim4-20030921-r1 index 41006feba796..da9950b4c26d 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r1 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r1 @@ -7,5 +7,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://globin.cse.psu.edu/ftp/dist/sim4/sim4.tar.gz _eclass_exported_funcs=src_compile:- src_install:- -_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=e1e0b2ce50bc94c54d2fb0ef73b85af3 diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1 b/metadata/md5-cache/sci-biology/snpfile-2.0.1 index dadfe012a265..b800586d3080 100644 --- a/metadata/md5-cache/sci-biology/snpfile-2.0.1 +++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1 @@ -9,5 +9,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=7fec83257ef5001d9827b0326638df67 diff --git a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 index 9fa0b0a8a927..85130438df9b 100644 --- a/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 +++ b/metadata/md5-cache/sci-biology/snpfile-2.0.1-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.birc.au.dk/~mailund/SNPFile/download/snpfile-2.0.1.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=18767f7f8f9a5ca8d5256c034b152bb7 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index bf1a22a7482c..69057ba3eb64 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -8,5 +8,5 @@ RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz https://dev.gentoo.org/~jlec/distfiles/stride-20060723-update.patch.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=01b4d26980038bd00786a70c9cd79963 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 index b3e87cfc9ce4..ad92dad342f6 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r1 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_11.00.8cbe486/T-COFFEE_distribution_Version_11.00.8cbe486.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=f6ad616b3dcf58a2f7c0551f7aea38a6 diff --git a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 index ffba9c0d9994..630ffa53b320 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 +++ b/metadata/md5-cache/sci-biology/t-coffee-9.03.1318-r1 @@ -10,5 +10,5 @@ RDEPEND=sci-biology/clustalw sci-chemistry/tm-align virtual/fortran SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Stable/Version_9.03.r1318/T-COFFEE_distribution_Version_9.03.r1318.tar.gz _eclass_exported_funcs=pkg_setup:fortran-2 src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e fortran-2 8200fc942c3b3c1fc75d4d5bfd0ba7a2 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=d6f0c1f80bcc0790b5e24d8e96f831bb diff --git a/metadata/md5-cache/sci-biology/tophat-1.0.12 b/metadata/md5-cache/sci-biology/tophat-1.0.12 index fd69b9b39240..f3d65285ce73 100644 --- a/metadata/md5-cache/sci-biology/tophat-1.0.12 +++ b/metadata/md5-cache/sci-biology/tophat-1.0.12 @@ -9,5 +9,5 @@ RDEPEND=sci-biology/bowtie SLOT=0 SRC_URI=http://tophat.cbcb.umd.edu/downloads/tophat-1.0.12.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=e77d3500a52473f554abdde6a1d91b6c diff --git a/metadata/md5-cache/sci-biology/tophat-2.1.1 b/metadata/md5-cache/sci-biology/tophat-2.1.1 index 56c84d8cb33c..70bde52fe778 100644 --- a/metadata/md5-cache/sci-biology/tophat-2.1.1 +++ b/metadata/md5-cache/sci-biology/tophat-2.1.1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/boost sci-biology/samtools:0.1-legacy sci-biology/bowtie:2 SLOT=0 SRC_URI=https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz _eclass_exported_funcs=pkg_postinst:- pkg_setup:python-single-r1 src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 python-single-r1 2ebea8fbab356d63110245129a67a6dd python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=99a8a65bd99f7819e12ab99f02b47509 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index 4dd69c6cb4f8..56f0d080700e 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -11,5 +11,5 @@ RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=9eb444bfbd258f8fbff3201843269bca diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 index fabc868425a4..ee5fee5614e6 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r2 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/wxGTK:2.8[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 _md5_=463bdbd7d7491edb402c46e04872d6d4 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index ff3aaa5a0266..a06f39dc0d31 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz _eclass_exported_funcs=src_prepare:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e wxwidgets 9b34ce3ca77f4e418e8fd9951c4c1cb1 _md5_=94801ab4d28dd1634e87d8bf16363fc6 diff --git a/metadata/md5-cache/sci-biology/trf-4.04 b/metadata/md5-cache/sci-biology/trf-4.04 index 79c992619fd8..e5d330ed1ec2 100644 --- a/metadata/md5-cache/sci-biology/trf-4.04 +++ b/metadata/md5-cache/sci-biology/trf-4.04 @@ -8,5 +8,5 @@ RESTRICT=mirror bindist SLOT=0 SRC_URI=http://tandem.bu.edu/trf/downloads/trf404.linux _eclass_exported_funcs=src_unpack:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=406c2b2b8a1c6b562b03f9449a9ff93c diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 b/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 index 31846a290c40..0dc2074fe6b1 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.23-r2 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl SLOT=0 SRC_URI=mirror://gentoo/trnascan-se-1.23.tar.bz2 _eclass_exported_funcs=src_prepare:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=058be692c482156e6c3af40ff90b77f3 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index 76ac4d04e163..66481215462b 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/perl:=[-build(-)] SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz _eclass_exported_funcs=src_unpack:unpacker src_prepare:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=439f7437ebed7cc03c5bda708d926e42 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 1491f67793b6..c09197e1f937 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -9,5 +9,5 @@ LICENSE=public-domain SLOT=0 SRC_URI=http://drive5.com/uchime/uchime4.2.40_src.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:cmake-utils src_compile:cmake-utils src_test:cmake-utils src_install:cmake-utils -_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=cmake-utils ac5bd012586c6cf0d9826400d9de2830 eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=4ce1a7d2ea0e053f87b43de98d267b9c diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 index 5d894a37f9a4..fd061fe7bd6b 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260 @@ -11,5 +11,5 @@ REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip _eclass_exported_funcs=pkg_prerm:webapp pkg_postinst:- pkg_setup:webapp src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c webapp 42c6ef7af496b228f9854b3c81e4b226 +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e webapp 42c6ef7af496b228f9854b3c81e4b226 _md5_=291204ab910d7f2b77d52afc8fcb6675 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8 b/metadata/md5-cache/sci-biology/unafold-3.8 index 9cd172358a57..90956eee7a96 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8 +++ b/metadata/md5-cache/sci-biology/unafold-3.8 @@ -7,5 +7,5 @@ LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 _eclass_exported_funcs=src_prepare:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=2d1fd089d7fa16c17dc630855c23d919 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index ea7b39bf1d20..2f39d983edae 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -8,5 +8,5 @@ LICENSE=unafold SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 _eclass_exported_funcs=src_prepare:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5a329c11948ef9c2c8a9dc980c9b5d8e diff --git a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 index ed243c99938e..95257c797bb1 100644 --- a/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 +++ b/metadata/md5-cache/sci-biology/update-blastdb-12.0.0 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl !sci-biology/ncbi-tools++ SLOT=0 SRC_URI=ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/ARCHIVE/12_0_0/ncbi_cxx--12_0_0.tar.gz _eclass_exported_funcs=src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=5b182e435bf1a57f378721081bcde2f0 diff --git a/metadata/md5-cache/sci-biology/vaal-46233 b/metadata/md5-cache/sci-biology/vaal-46233 index fad85680927c..3134d08806a0 100644 --- a/metadata/md5-cache/sci-biology/vaal-46233 +++ b/metadata/md5-cache/sci-biology/vaal-46233 @@ -10,5 +10,5 @@ RDEPEND=>=dev-libs/boost-1.41.0-r3 SLOT=0 SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc _eclass_exported_funcs=src_prepare:- src_configure:- src_compile:autotools-utils src_test:autotools-utils src_install:autotools-utils -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=0ad9661449bafe761159d8c78957d756 diff --git a/metadata/md5-cache/sci-biology/vaal-46233-r2 b/metadata/md5-cache/sci-biology/vaal-46233-r2 index ff1771f7230f..612f0a9d8c6c 100644 --- a/metadata/md5-cache/sci-biology/vaal-46233-r2 +++ b/metadata/md5-cache/sci-biology/vaal-46233-r2 @@ -10,5 +10,5 @@ RDEPEND=!sci-biology/allpaths !sci-biology/allpathslg SLOT=0 SRC_URI=ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/vaal-46233.tar.gz ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc _eclass_exported_funcs=src_prepare:- src_configure:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=a1c2d330ae12a66a3df20e7f8cd20509 diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.12b b/metadata/md5-cache/sci-biology/vcftools-0.1.12b index 22b3163b75e7..b25498d74258 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.12b +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.12b @@ -10,5 +10,5 @@ RDEPEND=lapack? ( virtual/lapack ) dev-lang/perl:=[-build(-)] SLOT=0 SRC_URI=mirror://sourceforge/vcftools/vcftools_0.1.12b.tar.gz _eclass_exported_funcs=src_unpack:unpacker src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=7368863377355bc85918b2e59c46abee diff --git a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 index eca6415bb190..3f6f8dd81b1b 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 +++ b/metadata/md5-cache/sci-biology/velvet-1.0.18-r1 @@ -10,5 +10,5 @@ RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.0.18.tgz _eclass_exported_funcs=pkg_postinst:- src_prepare:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=c6306e29894355e18255d2d534627ead diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 5aa11079963a..5213190a4ddc 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde flag-o-matic d270fa247153df66074f795fa42dba3e multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=6c8dee8e74b9fb4e57c4bc7e7bc7c782 diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 index ad27f27c0bf7..1e71e3e0441c 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.1 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/~ronny/RNA/ViennaRNA-2.1.1.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=6d978aca9747776d0b4fb8d647081e1e diff --git a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 index cb5e3090e1ab..06d6a382f824 100644 --- a/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 +++ b/metadata/md5-cache/sci-biology/vienna-rna-2.1.8 @@ -11,5 +11,5 @@ REQUIRED_USE=python? ( || ( python_targets_python2_7 ) ) SLOT=0 SRC_URI=http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz _eclass_exported_funcs=src_unpack:perl-module src_prepare:- src_configure:- src_compile:- src_test:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c unpacker 45d07319df5f40ee6af58418b0f930be +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c autotools-utils 419811142edf3516b0d0cf1a254d93cb distutils-r1 3a17743abcc9335483329f33c87b472d eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multibuild 742139c87a9fa3766f0c2b155e5522bf multilib d062ae4ba2fc40a19c11de2ad89b6616 multiprocessing e32940a7b2a9992ad217eccddb84d548 perl-functions aac50de73be0a80ebe780e0b20850130 perl-module c584f9e0fe426f3dcc2c46c6f7cb95ce python-r1 0f6937650a475d673baa5d0c8c0b37b3 python-utils-r1 c0ed2a2f233d3af6dd556048695dc5cb toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e unpacker 45d07319df5f40ee6af58418b0f930be _md5_=f3373f37e05509bac04eae39f236e5cc diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-5.4 b/metadata/md5-cache/sci-biology/wgs-assembler-5.4 index dcd1e84eaec0..c4bc621eb1d8 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-5.4 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-5.4 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-5.4.tar.bz2 _eclass_exported_funcs=src_configure:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=5c4f55f3feb698755af3af2b54cabd70 diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-6.1 b/metadata/md5-cache/sci-biology/wgs-assembler-6.1 index 5e02e49113a1..1edcc998f85d 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-6.1 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-6.1 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-6.1.tar.bz2 _eclass_exported_funcs=src_configure:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=f316356c9f780f64d9a495cb671c1b33 diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0 index 8457fe346111..50de657a054b 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0 @@ -9,5 +9,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 _eclass_exported_funcs=src_configure:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=abcdb729169ae5b79e27d5137ad6169a diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 index 9b8ad03a4653..ed721dec5830 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r1 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4pe SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 _eclass_exported_funcs=pkg_setup:- src_prepare:- src_configure:- src_compile:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 python efc1c55fc44c5b7272fc2ffba73c3e6f toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=66b0a3d64fe0cb82bc56cd4d19962722 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha index 9d7705463fb3..059bd98ab55f 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha @@ -10,5 +10,5 @@ RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz _eclass_exported_funcs=src_prepare:- src_compile:- src_test:- src_install:- -_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c versionator 99ae9d758cbe7cfed19170e7d48f5a9c +_eclasses_=eutils 792f83d5ec9536cb5ccef375469d8bde multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e versionator 99ae9d758cbe7cfed19170e7d48f5a9c _md5_=8eee710efb6992b2ba447f3f5b941f08 diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r1 b/metadata/md5-cache/sci-biology/yass-1.14-r1 index fd5a48c55a1d..e981259ad949 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r1 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r1 @@ -10,5 +10,5 @@ RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz _eclass_exported_funcs=src_prepare:- src_configure:- src_install:- -_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs bfd09e8e66991dd5ce9e57610d8d1e6c +_eclasses_=autotools 07e71b3b5690738ef7e8bc097077e00c eutils 792f83d5ec9536cb5ccef375469d8bde libtool 4890219c51da247200223277f993e054 multilib d062ae4ba2fc40a19c11de2ad89b6616 toolchain-funcs 77f907363e91028a361ce5a3e9e7ed1e _md5_=3d35f51c9a16817738548340df88ad12 |