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# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=4
inherit eutils toolchain-funcs
DESCRIPTION="Maximum likelihood analysis for nucleotide, amino acid, and two-state data"
HOMEPAGE="http://www.tree-puzzle.de"
SRC_URI="http://www.tree-puzzle.de/${P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="mpi"
DEPEND="mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"
RESTRICT="test"
pkg_setup () {
use mpi && [ $(tc-getCC) = icc ] && die "The parallelized version of tree-puzzle cannot be compiled using icc.
Either disable the \"mpi\" USE flag to compile only the non-parallelized
version of the program, or use gcc as your compiler (CC=\"gcc\")."
}
src_prepare() {
epatch "${FILESDIR}"/${PN}-impl-dec.patch
}
src_configure() {
default
if ! use mpi; then
sed \
-e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
-e 's:DIST_SOURCES = $(ppuzzle_SOURCES) $(puzzle_SOURCES):DIST_SOURCES = $(puzzle_SOURCES):' \
-i "${S}"/src/Makefile || die
fi
}
src_install() {
dobin src/puzzle
use mpi && dobin src/ppuzzle
dodoc AUTHORS ChangeLog README
# User manual
insinto /usr/share/doc/${PF}
doins doc/tree-puzzle.pdf
# Example data files
insinto /usr/share/${PN}/data
rm data/Makefile*
doins data/*
}
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