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| author |   Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2023-04-25 13:30:38 +0200 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@gentoo.org> | 2023-04-25 13:30:38 +0200 |
| commit | eb11c042a4a47b6b4ba249ab1e41e4117e51e21d (patch) | |
| tree | fc7fc53c155dc620badc2f831be9158cad821698 | |
| parent | sci-biology/RSeQC: treeclean, depends on nose (diff) | |
| download | sci-eb11c042a4a47b6b4ba249ab1e41e4117e51e21d.tar.gz sci-eb11c042a4a47b6b4ba249ab1e41e4117e51e21d.tar.bz2 sci-eb11c042a4a47b6b4ba249ab1e41e4117e51e21d.zip | |
sci-biology/trans-abyss: treeclean
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
| -rw-r--r-- | profiles/package.mask | 1 | ||||
| -rw-r--r-- | sci-biology/trans-abyss/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/trans-abyss/metadata.xml | 15 | ||||
| -rw-r--r-- | sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild | 35 |
4 files changed, 0 insertions, 52 deletions
diff --git a/profiles/package.mask b/profiles/package.mask index a8da49349..20d20abc8 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -33,4 +33,3 @@ # Andrew Ammerlaan <andrewammerlaan@gentoo.org) (12 Jan 2023) # Needs bump of PYTHON_COMPAT to at least python3_10 sci-biology/chiron -sci-biology/trans-abyss diff --git a/sci-biology/trans-abyss/Manifest b/sci-biology/trans-abyss/Manifest deleted file mode 100644 index 9addb1899..000000000 --- a/sci-biology/trans-abyss/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST trans-abyss-2.0.1.tar.gz 359063 BLAKE2B 9b3f19b883e2616b05bc0677b9161e8c997596b288af7e570a83129549edd517a941f765d39dfb83638160e611df3f2acfc32eb944c7cca63c8350e77fb96246 SHA512 5362665a2758a76c579d8086f8904cf0e40c8dff0dfa1c82368b38af25e37f2f2852f60c3001db254e5f06400e9e2e7f6f6c301133b7806d47cee189f84a0f0f diff --git a/sci-biology/trans-abyss/metadata.xml b/sci-biology/trans-abyss/metadata.xml deleted file mode 100644 index 079fb5aae..000000000 --- a/sci-biology/trans-abyss/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">bcgsc/transabyss</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild b/sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild deleted file mode 100644 index cf10dd3b9..000000000 --- a/sci-biology/trans-abyss/trans-abyss-2.0.1.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{7,8,9} ) - -inherit python-r1 - -DESCRIPTION="Analyze and combine multiple assemblies from abyss" -HOMEPAGE="https://www.bcgsc.ca/resources/software/trans-abyss" -SRC_URI="https://github.com/bcgsc/transabyss/archive/${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="GPL-3" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -DEPEND="${PYTHON_DEPS} - dev-lang/perl - dev-python/python-igraph[${PYTHON_USEDEP}] - sci-biology/abyss - sci-biology/blat -" -RDEPEND="${DEPEND}" - -S="${WORKDIR}/transabyss-${PV}" - -src_install() { - einstalldocs - python_foreach_impl python_domodule utilities - dobin transabyss - dobin transabyss-merge -} |